{"id":"W2314881324","doi":"10.1021/es502794h","title":"Insertion/Deletion-Based Approach for the Detection of <i>Escherichia coli</i> O157:H7 in Freshwater Environments","year":2014,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Escherichia coli; Biology; TaqMan; Pathogen; Serotype; Microbiology; Polymerase chain reaction; Plasmid; Enterobacteriaceae; Genome; Gene; DNA; Heterologous; Genetics; Virology; Molecular biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001026719,0.00083419,0.0008509227,0.0005874321,0.0001710244,0.0005452792,0.0007035033,0.0007122236,0.0006004765],"category_scores_gemma":[0.0009308002,0.0004056917,0.0006588996,0.0003936249,0.0005505337,0.0003611246,0.0005993862,0.001058725,0.0006275764],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003829789,"about_ca_system_score_gemma":0.0004835316,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007402058,"about_ca_topic_score_gemma":0.001504381,"domain_scores_codex":[0.9987877,0.0002638226,0.00007981937,0.0003157204,0.0004282507,0.0001247036],"domain_scores_gemma":[0.9992894,0.0001892163,0.0002511499,0.00006426963,0.0001487479,0.000057144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002138888,0.00003030859,0.0004160937,0.00003424357,0.000005354179,0.0000120122,0.000009255516,0.00006494179,0.9974629,0.00003495731,0.00001934173,0.001889157],"study_design_scores_gemma":[0.000004773122,0.0003815149,0.002564923,0.000008423948,0.00003731934,0.0002209172,0.00004475187,0.001614286,0.994304,0.00003102151,0.0007732068,0.00001489144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6435169,0.00201714,0.3488698,0.00027658,0.0001609344,0.000698771,0.001282675,0.00105908,0.00211805],"genre_scores_gemma":[0.6503227,0.002721881,0.3404573,0.0004273412,0.00004356136,0.0004490277,0.001924626,0.0001598077,0.00349371],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001026719,"threshold_uncertainty_score":0.005429864,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00633912571159279,"score_gpt":0.2202496489529489,"score_spread":0.2139105232413561,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}