{"id":"W2315955545","doi":"10.3732/ajb.1500412","title":"A few‐gene plastid phylogenetic framework for mycoheterotrophic monocots","year":2016,"lang":"en","type":"article","venue":"American Journal of Botany","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Plastid; Phylogenetic tree; Evolutionary biology; Phylogenetics; Gene; Botany; Genetics; Chloroplast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001261227,0.00008677537,0.0001962566,0.00001699741,0.0001039371,0.00001652167,0.0002095562,0.00003893088,0.00005768571],"category_scores_gemma":[0.00009991565,0.00002806732,0.0001394087,0.0001542058,0.0001086242,0.00008748791,0.00002361759,0.00006677807,0.0000188657],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003394255,"about_ca_system_score_gemma":0.000008511018,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001886821,"about_ca_topic_score_gemma":0.00001162647,"domain_scores_codex":[0.9992942,0.00004401754,0.0001854404,0.0001108361,0.000149705,0.0002157749],"domain_scores_gemma":[0.9991092,0.000359381,0.0002941267,0.00002986777,0.0000855917,0.0001217964],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003723527,0.00005006646,0.008989923,0.000001209968,0.00004121723,0.00001103177,0.0000281236,0.000005520874,0.8206782,0.00005159899,0.0009351496,0.1688356],"study_design_scores_gemma":[0.001075165,0.01012157,0.9102264,0.0003661116,0.0001404631,0.0005051158,0.0004653386,0.00004905869,0.0222795,0.008900854,0.04524806,0.0006223727],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954543,0.0001170293,0.002131953,0.00196977,0.0001623512,0.00006447631,0.000076042,0.000009123649,0.0000150208],"genre_scores_gemma":[0.9961545,0.0002794815,0.002918622,0.0002114405,0.0004103236,0.00000172522,9.221359e-7,7.208487e-7,0.00002229611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9012365,"threshold_uncertainty_score":0.1144552,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01523003229052967,"score_gpt":0.2069803569199249,"score_spread":0.1917503246293952,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}