{"id":"W2316213795","doi":"10.1042/bj20111620","title":"EscI: a crucial component of the type III secretion system forms the inner rod structure in enteropathogenic <i>Escherichia coli</i>","year":2011,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Virulence; Secretion; Type three secretion system; Effector; Inner membrane; Escherichia coli; Cytoplasm; Biology; Cell biology; Microbiology; Gene; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003542863,0.0001612229,0.0001927113,0.00002913681,0.0001418957,0.00002134915,0.0005555749,0.0001573214,0.00001594805],"category_scores_gemma":[0.0001247919,0.00008560334,0.0001468074,0.0002212855,0.0002229507,0.000005511195,0.0003624765,0.0004252856,0.000001178238],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000617407,"about_ca_system_score_gemma":0.0001425746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002511271,"about_ca_topic_score_gemma":0.00003091384,"domain_scores_codex":[0.9986504,0.0001809929,0.0003671125,0.0001995078,0.0003037633,0.0002982524],"domain_scores_gemma":[0.999216,0.00001226359,0.0001997514,0.0003062779,0.0001841651,0.00008152407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003909107,0.00005651591,0.005462694,0.00002714564,0.00006365855,0.000003499862,0.0002159149,0.00000304624,0.9929252,0.00008584584,0.0006717555,0.0000938288],"study_design_scores_gemma":[0.001580114,0.0004117114,0.05033314,0.000163414,0.0000517618,0.0001781023,0.000817869,0.000165744,0.9438766,0.0001606234,0.002004696,0.0002562672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977065,0.001182308,0.00008399034,0.0001207253,0.0002977008,0.0002417287,0.00001472933,0.000004514407,0.0003477956],"genre_scores_gemma":[0.9991698,0.0001544556,0.0002059454,0.0001294995,0.000276053,0.00000945227,0.000007164192,0.00001568602,0.00003189689],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04904862,"threshold_uncertainty_score":0.3490803,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01300570777735471,"score_gpt":0.2338570407101641,"score_spread":0.2208513329328094,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}