{"id":"W2316972784","doi":"10.1107/s0108767308091708","title":"Mechanism for formation of Arg-AMP in help of tRNA on the basis of structure of ArgRS, tRNA and ATP","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations of Crystallography","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network","funders":"","keywords":"Transfer RNA; Mechanism (biology); Chemistry; Biochemistry; RNA; Physics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003462691,0.0002055561,0.0004287912,0.0007614757,0.0001016513,0.000005439007,0.0002458716,0.0002567485,0.00002244736],"category_scores_gemma":[0.0002095032,0.0001737749,0.000369803,0.0006886918,0.0004571799,0.00003156599,0.00004691778,0.00009478255,7.051089e-9],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005898446,"about_ca_system_score_gemma":0.00005651337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008416251,"about_ca_topic_score_gemma":0.000226797,"domain_scores_codex":[0.9982957,0.0001435376,0.0008409254,0.0002676651,0.000278615,0.0001735637],"domain_scores_gemma":[0.9979169,0.0001734826,0.0009574533,0.0004752752,0.0004356931,0.00004116533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003813958,0.00019723,0.001511073,0.0002305352,0.0001515562,8.240126e-8,0.00027303,0.00003869281,0.9928962,0.004025267,0.00003825147,0.0002566959],"study_design_scores_gemma":[0.001089169,0.001381482,0.00767613,0.0001242786,0.00008952728,0.00001384263,0.0005002928,0.00004395354,0.9750941,0.01204219,0.00174764,0.0001973557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9837722,0.0001283386,0.01472529,0.0001690199,0.00007493032,0.0007789567,0.0002441478,0.00000646709,0.0001006579],"genre_scores_gemma":[0.9955655,0.0008093811,0.003372557,0.00002878597,0.00002355416,0.00005191098,0.0001198828,0.0000215273,0.000006868753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01780205,"threshold_uncertainty_score":0.7086335,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01590863799475817,"score_gpt":0.2345256855046951,"score_spread":0.2186170475099369,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}