{"id":"W2316995750","doi":"10.1089/aid.2014.5480.abstract","title":"Multiple T-cell Epitopes of HIV-1 Nef Containing Positively Selected Mutations Associated with Different Disease Outcome","year":2014,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Public health; Agency (philosophy); Human immunodeficiency virus (HIV); Medicine; Library science; Family medicine; Sociology; Pathology; Social science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006240219,0.0001726928,0.0003321881,0.00008671259,0.0008824538,0.000127534,0.0002614071,0.0000541535,0.0000697273],"category_scores_gemma":[0.001911136,0.00006749603,0.00004834282,0.000489519,0.0005638034,0.000140882,0.0001930574,0.000320684,0.000008011246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005056913,"about_ca_system_score_gemma":0.00002179233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006260659,"about_ca_topic_score_gemma":0.002568637,"domain_scores_codex":[0.997517,0.0005057515,0.0002570511,0.0003520665,0.0007244593,0.0006436295],"domain_scores_gemma":[0.9961189,0.002828938,0.00009347649,0.000075278,0.0005604082,0.0003229704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002208926,0.0002422274,0.8524951,0.00001997912,0.00005023556,0.000007894651,0.00009335185,6.426981e-7,0.1455535,0.0004476541,0.0001873216,0.0006812112],"study_design_scores_gemma":[0.0005446966,0.003036252,0.9893541,0.00006521165,0.00001502262,3.914668e-7,0.0003187363,0.00002380218,0.005895665,0.0003725195,0.00022172,0.0001519267],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979357,0.0001233665,0.000005530185,0.000158489,0.000007185907,0.0003203492,0.0009482589,0.00005269713,0.0004484426],"genre_scores_gemma":[0.9989132,0.00004236767,0.00002551636,0.00002981891,0.00005804065,0.00004667433,0.0003380081,0.000002821455,0.0005435309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1396578,"threshold_uncertainty_score":0.678721,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07557274841743031,"score_gpt":0.3144624923512204,"score_spread":0.2388897439337901,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}