{"id":"W2317394466","doi":"10.1373/clinchem.2015.244236","title":"Mass Spectrometry–Based Escherichia coli H Antigen/Flagella Typing: Validation and Comparison with Traditional Serotyping","year":2016,"lang":"en","type":"article","venue":"Clinical Chemistry","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Typing; Serotype; Biology; Escherichia coli; Microbiology; Antigen; Repeatability; Antiserum; Genetics; Chromatography; Chemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006782505,0.001418052,0.000693203,0.002367639,0.0007841779,0.001324904,0.001642784,0.00134214,0.0004039268],"category_scores_gemma":[0.008352302,0.0003654853,0.0005947539,0.001865046,0.001873835,0.0005559871,0.001275857,0.000614718,0.0003413567],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002878252,"about_ca_system_score_gemma":0.002719107,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05379126,"about_ca_topic_score_gemma":0.06869673,"domain_scores_codex":[0.992342,0.001093063,0.0003901168,0.001682732,0.004092159,0.0004000289],"domain_scores_gemma":[0.995294,0.0008195419,0.0008061634,0.0003893128,0.002415597,0.000275347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001440163,0.0003565708,0.118465,0.0005825362,0.0004000366,0.0002142686,0.0006179135,0.001679585,0.8231269,0.0002476608,0.0004011383,0.05246826],"study_design_scores_gemma":[0.0001167949,0.002159679,0.4338125,0.0001346147,0.0005430407,0.001832438,0.0004318175,0.02066527,0.5351092,0.0002169814,0.004833499,0.0001442523],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9638554,0.004223189,0.02819477,0.0002551499,0.00007057541,0.0003601648,0.001226023,0.0003723846,0.001442349],"genre_scores_gemma":[0.9258745,0.00192589,0.06957736,0.0002433633,0.00005151989,0.0001101951,0.001566126,0.00005522182,0.0005958329],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05379126,"threshold_uncertainty_score":0.1069563,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06173062244154418,"score_gpt":0.33930279439182,"score_spread":0.2775721719502758,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}