{"id":"W2319921832","doi":"10.4269/ajtmh.13-0525","title":"Prevalence of Human-Active and Variant 1 Strains of the Tick-Borne Pathogen Anaplasma phagocytophilum in Hosts and Forests of Eastern North America","year":2014,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"York University; Bard College; Division of Environmental Biology; Washington State University; Texas Tech University; National Science Foundation","keywords":"Anaplasma phagocytophilum; Pathogen; Biology; Tick; Tick-borne disease; Anaplasma; Virology; Anaplasmataceae; Microbiology; Immunology; Borrelia burgdorferi","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002728865,0.0001748795,0.000152258,0.0007806832,0.0003963898,0.0003775881,0.0002195953,0.0001949399,0.0006667525],"category_scores_gemma":[0.0004503901,0.0001852648,0.00009189797,0.0004000903,0.0003451604,0.0003347397,0.0002824593,0.000142668,0.00008296104],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002755625,"about_ca_system_score_gemma":0.0002047744,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02696613,"about_ca_topic_score_gemma":0.05608459,"domain_scores_codex":[0.9998299,0.00003992202,0.00001536981,0.00004327052,0.00003066023,0.00004086165],"domain_scores_gemma":[0.9994705,0.00006646102,0.0002358937,0.00002432403,0.00007862309,0.0001241031],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000035766,0.00002584614,0.9971948,0.000007511705,0.00001187409,0.00005275433,0.0003640451,0.00002164637,0.001207513,0.00001300209,0.00004610512,0.00101918],"study_design_scores_gemma":[9.199443e-7,0.00001960854,0.9994546,0.000003060845,0.000003513053,0.00009717569,0.0002928964,0.00003030702,0.00004646179,0.000004255748,0.00004626975,0.000001130424],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999656,0.0001043975,0.00001518745,0.000006285775,6.440243e-7,0.000002500471,0.00007294622,0.000001286549,0.0001407815],"genre_scores_gemma":[0.9997167,0.00008006882,0.00003636416,0.000008525822,0.000001431783,0.00000262333,0.00008558796,4.59491e-7,0.0000683146],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02696613,"threshold_uncertainty_score":0.05361831,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009967048950471288,"score_gpt":0.2500180980039181,"score_spread":0.2400510490534468,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}