{"id":"W2320579030","doi":"10.2298/abs151120023s","title":"DUF1070 as a signature domain of a subclass of arabinogalactan peptides","year":2016,"lang":"en","type":"article","venue":"Archives of Biological Sciences","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences","funders":"Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja","keywords":"Arabinogalactan; Signal peptide; Peptide; Linker; Biology; Subclass; Function (biology); Peptide sequence; Sequence (biology); Biochemistry; Domain (mathematical analysis); N-terminus; Computational biology; Genetics; Gene; Mathematics; Computer science; Polysaccharide","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003787444,0.0001314972,0.0003254245,0.0000274831,0.00008435435,0.000007256662,0.0006710574,0.00009056587,0.0003890852],"category_scores_gemma":[0.0001943821,0.00003302637,0.0001850223,0.0003141303,0.00156978,0.00007754759,0.000132368,0.00005941726,0.000005797564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002720576,"about_ca_system_score_gemma":0.00001718014,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000240683,"about_ca_topic_score_gemma":0.00007174571,"domain_scores_codex":[0.9986537,0.0001369677,0.0003603737,0.0003078095,0.0002423567,0.0002988529],"domain_scores_gemma":[0.9975905,0.001934528,0.000297607,0.00005901877,0.00002548616,0.0000928568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008060332,0.00007512739,0.05090705,0.000005464916,0.000008254264,0.000001322919,0.00006741074,4.538342e-7,0.9038153,0.006752063,0.00002043344,0.03826652],"study_design_scores_gemma":[0.0002087065,0.003119079,0.4260994,0.0001951001,0.000007729764,0.000009787764,0.0004173717,0.000009883927,0.4802128,0.08787858,0.001615536,0.0002260277],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990976,0.0002956607,0.000009775881,0.0007975719,0.00003994042,0.0001166949,0.0001346516,0.00001483586,0.007614904],"genre_scores_gemma":[0.9988143,0.0004281134,0.0005641297,0.00004469342,0.00003721417,0.000002833128,0.000004206095,3.400001e-7,0.0001041137],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4236025,"threshold_uncertainty_score":0.5783919,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02150351568173698,"score_gpt":0.2187861799840998,"score_spread":0.1972826643023628,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}