{"id":"W2322138869","doi":"10.1371/currents.rrn1040","title":"SeqMonitor: Influenza Analysis Pipeline and Visualization","year":2009,"lang":"en","type":"article","venue":"PLoS Currents","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Genome Atlantic; Killam Trusts; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Metadata; Upload; GenBank; Computer science; World Wide Web; Visualization; Pipeline (software); Data science; Data mining; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001691287,0.001873676,0.000856975,0.001989819,0.0006051816,0.001797585,0.002263008,0.0007088434,0.04865562],"category_scores_gemma":[0.002562852,0.0009131408,0.0012223,0.0009384481,0.0002367517,0.001450636,0.001541218,0.001739276,0.01768613],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00072554,"about_ca_system_score_gemma":0.001530969,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005765421,"about_ca_topic_score_gemma":0.004539754,"domain_scores_codex":[0.9995142,0.00007190461,0.00005008561,0.000123625,0.0001894815,0.00005080452],"domain_scores_gemma":[0.9992713,0.0002435786,0.00004813059,0.0001084067,0.0002187272,0.0001098519],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001651735,0.0001673282,0.003609915,0.0006529926,0.0001839858,0.0002396912,0.0003886915,0.006973576,0.02096435,0.003708312,0.8705465,0.09091301],"study_design_scores_gemma":[0.001454345,0.0003139729,0.01400696,0.0002577576,0.0001639834,0.0004080622,0.0002007458,0.3635749,0.06213489,0.02259403,0.5344059,0.0004844768],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.005540198,0.0002673152,0.1673613,0.0005571966,0.0002586253,0.000515477,0.1369185,0.6810812,0.007500099],"genre_scores_gemma":[0.09328929,0.0007897458,0.4548644,0.001911896,0.0003021455,0.003647437,0.3412207,0.08784059,0.0161338],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.04865562,"threshold_uncertainty_score":0.1627693,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1201328451399646,"score_gpt":0.441913528702677,"score_spread":0.3217806835627124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}