{"id":"W2322774127","doi":"10.1139/cjm-2013-0156","title":"Population genetics of <i>Haemophilus influenzae</i> serotype a in three Canadian provinces","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; Ste. Anne's Hospital; Manitoba Health; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Multilocus sequence typing; Serotype; Biology; Haemophilus influenzae; Virology; Polymerase chain reaction; Genetics; clone (Java method); Phylogenetic tree; Microbiology; Pathogen; Typing; Population; Genotype; Bacteria; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001008467,0.000549508,0.0005367512,0.002287056,0.004608483,0.001421581,0.001376987,0.0005565067,0.00177324],"category_scores_gemma":[0.001642583,0.0003961409,0.000769565,0.002940487,0.001237785,0.0001794676,0.0007865064,0.0006378256,0.0001778559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.04554764,"about_ca_system_score_gemma":0.04427774,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9967295,"about_ca_topic_score_gemma":0.9973128,"domain_scores_codex":[0.998679,0.0001210969,0.00004602037,0.000271582,0.000328838,0.0005534072],"domain_scores_gemma":[0.9983733,0.000102518,0.0001233626,0.00005667683,0.0009727429,0.0003713597],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006921429,0.0001189922,0.9526507,0.00008867155,0.0002547723,0.0004547816,0.00777086,0.00190455,0.007686217,0.002303719,0.003278067,0.02279648],"study_design_scores_gemma":[0.0000270029,0.00006459394,0.9920726,0.00002744653,0.00005115359,0.0001771881,0.00294167,0.00105415,0.0003687745,0.0001033303,0.003068786,0.00004315813],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938809,0.0004258953,0.0003952559,0.0001953028,0.00001543396,0.00009481668,0.001334057,0.0000165264,0.003641787],"genre_scores_gemma":[0.9972773,0.0002007406,0.0005362984,0.00006935708,0.000002667938,0.00002011517,0.0007786526,0.000007822504,0.001107003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04554764,"threshold_uncertainty_score":0.3304728,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01212405935694533,"score_gpt":0.2126393953100772,"score_spread":0.2005153359531319,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}