{"id":"W2323930444","doi":"10.1186/s12864-016-2597-2","title":"The compact genome of the plant pathogen Plasmodiophora brassicae is adapted to intracellular interactions with host Brassica spp","year":2016,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":145,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Agriculture and Agri-Food Canada; University of Alberta","funders":"","keywords":"Biology; Brassica; Host (biology); Genome; Pathogen; Genetics; DNA microarray; Alternaria brassicae; Clubroot; Botany; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001023506,0.000411143,0.000275605,0.0003644476,0.0002748134,0.0003832922,0.0002045241,0.00038975,0.001056628],"category_scores_gemma":[0.0003350466,0.0002095567,0.0004023864,0.0006877413,0.0002092411,0.0002343672,0.0003511732,0.0006473267,0.0006104294],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002036385,"about_ca_system_score_gemma":0.0002137273,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001086217,"about_ca_topic_score_gemma":0.001791995,"domain_scores_codex":[0.9999267,0.000005480694,0.000003592477,0.00003032333,0.00002267773,0.00001123853],"domain_scores_gemma":[0.9997397,0.00006685269,0.00008979282,0.00004012322,0.00002465366,0.00003895238],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001710181,0.00001869724,0.003438665,0.0001976389,0.00001955674,0.0002093095,0.0001309608,0.0004011411,0.9894099,0.00009869839,0.0001581072,0.005746243],"study_design_scores_gemma":[0.0001017269,0.00102666,0.5545231,0.0002495397,0.0004172429,0.008398523,0.0007638078,0.007604724,0.37155,0.001285883,0.05396758,0.0001113935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9805382,0.001050506,0.008397679,0.0001156997,0.00002316466,0.00004290399,0.008078319,0.0005296342,0.001223995],"genre_scores_gemma":[0.9470199,0.0009742663,0.01975193,0.00008955213,0.00001838944,0.00006726079,0.03009354,0.0002431592,0.001741915],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001086217,"threshold_uncertainty_score":0.003534794,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02135122987617913,"score_gpt":0.1974604223438462,"score_spread":0.1761091924676671,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}