{"id":"W2325367485","doi":"10.1093/femsec/fiv042","title":"Anaerobic alkane biodegradation by cultures enriched from oil sands tailings ponds involves multiple species capable of fumarate addition","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Methylcyclopentane; Alkane; Deltaproteobacteria; Methanogenesis; Tailings; Biology; Environmental chemistry; Biodegradation; AlkB; Hydrocarbon; Enrichment culture; Clostridia; Biochemistry; Organic chemistry; Gammaproteobacteria; Chemistry; Methane; Ecology; Bacteria; Gene; 16S ribosomal RNA; Catalysis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001636807,0.0006428444,0.0004776674,0.0002772213,0.000313807,0.000584505,0.0002331925,0.0002733313,0.0004384895],"category_scores_gemma":[0.0002594052,0.0002202671,0.0003534339,0.0002880426,0.0002094079,0.0002481735,0.0006236459,0.0003979228,0.0003249603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003005381,"about_ca_system_score_gemma":0.0005125541,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005771892,"about_ca_topic_score_gemma":0.006723677,"domain_scores_codex":[0.99977,0.00001902998,0.00002857916,0.00006115808,0.0000609755,0.00006026069],"domain_scores_gemma":[0.9998291,0.00003398682,0.00003027406,0.00001631404,0.00004099483,0.00004932002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001800034,0.00004554729,0.003317071,0.00002202651,0.000006258368,0.00006464284,0.00005453741,0.00005421858,0.9950219,0.000008717501,0.00001021957,0.001214677],"study_design_scores_gemma":[0.00002375744,0.00105875,0.04845525,0.00001348255,0.00006277029,0.0003695085,0.0003904533,0.001135757,0.9475276,0.00004684968,0.0008980456,0.00001778566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992241,0.00007122903,0.0002244644,0.00001826806,0.000005244578,0.00001165245,0.0001485719,0.00001222177,0.0002842542],"genre_scores_gemma":[0.9945279,0.000200354,0.002114761,0.00002968634,0.00001022742,0.00002896665,0.00117948,0.00001131051,0.001897388],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005771892,"threshold_uncertainty_score":0.01147664,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01390211606204201,"score_gpt":0.2058403199923897,"score_spread":0.1919382039303477,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}