{"id":"W2326071698","doi":"10.1097/mib.0000000000000591","title":"Adherent-invasive Escherichia coli Exacerbates Antibiotic-associated Intestinal Dysbiosis and Neutrophil Extracellular Trap Activation","year":2015,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Dysbiosis; Neutrophil extracellular traps; Microbiology; Biology; Gut flora; Immunology; Antibiotics; Immune system; Inflammatory bowel disease; Inflammation; Medicine; Disease; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002315855,0.0006075447,0.0004353794,0.0003729017,0.0001328481,0.0003784418,0.0001527552,0.0005117984,0.001322542],"category_scores_gemma":[0.0002418279,0.0001906918,0.0002031302,0.000161754,0.0003207484,0.0002205428,0.0003675373,0.0009151031,0.0001831765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002079168,"about_ca_system_score_gemma":0.0002233086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000178141,"about_ca_topic_score_gemma":0.0005323386,"domain_scores_codex":[0.9996289,0.00007565986,0.00002952317,0.00006018046,0.00009828591,0.0001074205],"domain_scores_gemma":[0.999451,0.00003349612,0.0002661598,0.00002183591,0.00003629359,0.0001911925],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009943598,0.0002069903,0.004084249,0.00009980364,0.00001598028,0.0002831897,0.00003621529,0.00005038954,0.9925333,0.00002815193,0.00005201044,0.001615284],"study_design_scores_gemma":[0.0001277632,0.01146446,0.3352937,0.0001287358,0.0001683622,0.004630856,0.0005033095,0.002000618,0.6425588,0.0002506487,0.002842808,0.0000299929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982351,0.0007909467,0.0004085911,0.00006799883,0.00001139098,0.00002564892,0.0001113443,0.00002083935,0.000328079],"genre_scores_gemma":[0.9976308,0.0005810364,0.0008282192,0.0001032327,0.00001974858,0.00003545781,0.000191098,0.000007405687,0.0006029323],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001322542,"threshold_uncertainty_score":0.004424334,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01544234711072165,"score_gpt":0.2390273220518433,"score_spread":0.2235849749411216,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}