{"id":"W2326083130","doi":"10.1155/2016/8207418","title":"Characterization of<i>Clostridium difficile</i>Strains in British Columbia, Canada: A Shift from NAP1 Majority (2008) to Novel Strain Types (2013) in One Region","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Island Health; Providence Health Care; BC Centre for Disease Control; University of British Columbia","funders":"British Columbia Centre for Disease Control; Public Health Agency; Public Health Agency of Canada","keywords":"Clostridium difficile; Pulsed-field gel electrophoresis; Ribotyping; Microbiology; Clostridium difficile toxin A; Molecular epidemiology; Metronidazole; Multilocus sequence typing; Pore-forming toxin; Genotype; Clostridium difficile toxin B; Nap; Biology; Medicine; Toxin; Antibiotics; Genetics; Microbial toxins; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002840274,0.0003601845,0.0002797492,0.00182414,0.002559266,0.0009466062,0.0007727966,0.0003679075,0.001230659],"category_scores_gemma":[0.0009368584,0.000270165,0.0002509704,0.003178331,0.0004671848,0.0001831964,0.0005590714,0.0004418875,0.000245843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01536055,"about_ca_system_score_gemma":0.01792899,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9920922,"about_ca_topic_score_gemma":0.9956521,"domain_scores_codex":[0.9994168,0.00002029099,0.000032243,0.0001044568,0.0002345953,0.0001916121],"domain_scores_gemma":[0.9983402,0.0000552293,0.0001822345,0.00003077044,0.001038463,0.0003529871],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003231358,0.00008497204,0.9438166,0.0001890107,0.00005178863,0.001135622,0.002601664,0.0003893913,0.0186404,0.0001386405,0.002881515,0.02974739],"study_design_scores_gemma":[0.000004494458,0.00003956646,0.9954306,0.00003411743,0.00001296415,0.0002706955,0.001456194,0.0001813447,0.0005781664,0.000008130919,0.001972876,0.00001085528],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942312,0.0006706463,0.0001861641,0.0002058349,0.00001023807,0.00005756357,0.002311019,0.00001746461,0.002310029],"genre_scores_gemma":[0.9939499,0.0007226747,0.0006648955,0.0002746011,0.000005102787,0.00002125055,0.002442224,0.0000112939,0.001908141],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01536055,"threshold_uncertainty_score":0.1114491,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01011476334994978,"score_gpt":0.2150808179571732,"score_spread":0.2049660546072234,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}