{"id":"W2329170228","doi":"10.1139/gen-2014-0002","title":"Nuclear and chloroplast DNA phylogeny reveals complex evolutionary history of<i>Elymus pendulinus</i>","year":2014,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saint Mary's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Triticeae; Chloroplast DNA; Genome; Elymus; Reticulate evolution; Ploidy; Nuclear gene; Evolutionary biology; Phylogenetic tree; Phylogenetics; Genetics; Polyploid; Reticulate; Genome evolution; Introgression; Nuclear DNA; Gene; Botany; Mitochondrial DNA; Poaceae","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001122361,0.0001332926,0.0001776128,0.000898711,0.0002493064,0.0002335822,0.0001523299,0.0002017824,0.0005847302],"category_scores_gemma":[0.0001487772,0.0001039181,0.0001065514,0.0004701476,0.0001490824,0.0001716372,0.0002507099,0.000172714,0.0001969517],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001933191,"about_ca_system_score_gemma":0.0000716381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009946873,"about_ca_topic_score_gemma":0.00195737,"domain_scores_codex":[0.9999319,0.000008163847,0.000004781316,0.0000309413,0.00001002845,0.00001422455],"domain_scores_gemma":[0.9998922,0.00002701232,0.00003376192,0.00001061007,0.00001629703,0.00002006683],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001445101,0.00001927636,0.07953281,0.00004974471,0.00002531219,0.00027421,0.0004233619,0.0002261751,0.9100661,0.0001353756,0.00002353391,0.009079672],"study_design_scores_gemma":[0.00000496681,0.00008908958,0.9803736,0.000008447233,0.00001948682,0.0006630566,0.0002802856,0.0007107883,0.01547478,0.00008469461,0.002280377,0.00001047548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993418,0.0001057133,0.000227496,0.000005048082,6.229345e-7,0.000001217666,0.00008542891,0.000004419435,0.0002282876],"genre_scores_gemma":[0.9978422,0.00008732498,0.0005824145,0.00001688649,0.000002189894,0.000005797047,0.0008929606,0.000006964933,0.0005633355],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009946873,"threshold_uncertainty_score":0.001977801,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01992204745422507,"score_gpt":0.1822277338906838,"score_spread":0.1623056864364587,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}