{"id":"W2329265721","doi":"10.1155/2008/402613","title":"A Traveller in Time: Phylogenetic Analysis to Identify a Disseminated Infection Acquired 30 Years Earlier","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Phylogenetic tree; Genealogy; Evolutionary biology; Biology; Computational biology; Geography; Virology; History; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001597289,0.0003875724,0.0003381933,0.001266273,0.000846619,0.00075987,0.0003170675,0.0009029129,0.004080783],"category_scores_gemma":[0.0005792422,0.0001469065,0.0003472664,0.001087696,0.0002884914,0.0004413529,0.0004253875,0.0009605597,0.0007462344],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003537526,"about_ca_system_score_gemma":0.0004845462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01109081,"about_ca_topic_score_gemma":0.01233224,"domain_scores_codex":[0.9998541,0.00002031462,0.00001195726,0.0000301995,0.0000254991,0.00005790182],"domain_scores_gemma":[0.9996792,0.00004710473,0.00006473621,0.00001319042,0.00006705578,0.0001287443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"case_report","study_design_scores_codex":[0.001551672,0.0004776636,0.7989228,0.0002031289,0.0001256233,0.08541744,0.00359472,0.0003314659,0.07801415,0.0009297158,0.002794207,0.02763741],"study_design_scores_gemma":[0.00003430213,0.0009619743,0.8613496,0.0001848176,0.0001798462,0.110528,0.008993516,0.001155776,0.008171192,0.0003683141,0.008013415,0.00005921611],"study_design_candidate":"case_report","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955783,0.0004223231,0.0005508194,0.0004517871,0.00002861954,0.00003000426,0.0004834379,0.00001380906,0.002440857],"genre_scores_gemma":[0.9950158,0.000482283,0.002014573,0.0002901766,0.00002209559,0.00001148967,0.0005140884,0.00001796232,0.00163161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01109081,"threshold_uncertainty_score":0.02205253,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004658301963641301,"score_gpt":0.2306412339300122,"score_spread":0.2259829319663709,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}