{"id":"W2331640762","doi":"10.1371/currents.rrn1147","title":"Host Dependent Evolutionary Patterns and the Origin of 2009 H1N1 Pandemic Influenza","year":2010,"lang":"en","type":"article","venue":"PLoS Currents","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Host (biology); Virus; Pandemic; Biology; Influenza A virus; Influenza A virus subtype H5N1; Virology; Viral evolution; Evolutionary biology; Imperfect; Coronavirus disease 2019 (COVID-19); Genetics; Medicine; Genome; Disease; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002892107,0.0001441693,0.0002988932,0.00009946671,0.0001144497,0.00001121713,0.0001549522,0.00007158508,0.0001483119],"category_scores_gemma":[0.0006502038,0.00008833309,0.00006257145,0.000106873,0.0003717793,0.00008402077,0.0002029042,0.0005823228,0.00006125221],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003372142,"about_ca_system_score_gemma":0.00008676293,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001485593,"about_ca_topic_score_gemma":0.00004789449,"domain_scores_codex":[0.9985387,0.00006360348,0.0002852252,0.0002093857,0.0006124425,0.0002906952],"domain_scores_gemma":[0.9990599,0.0001896964,0.00009249635,0.0003320819,0.0002115016,0.0001143024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003712193,0.0001943229,0.9896887,0.0001741589,0.0001636809,0.000004628871,0.0003748924,4.398103e-7,0.006470703,0.0001847112,0.000624151,0.001748382],"study_design_scores_gemma":[0.006055117,0.0001032238,0.9838119,0.0002256745,0.0001445877,0.00002454471,0.0001122557,0.0003093427,0.001869349,0.0001677758,0.007043005,0.0001332428],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962797,0.002024384,0.000005652343,0.000198278,0.000208944,0.0005625484,0.0001093485,0.00003258183,0.0005785284],"genre_scores_gemma":[0.9986578,0.000650424,0.00005484501,0.0002721082,0.0001644588,0.00006132675,0.000007395241,0.00001382119,0.0001177895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006418854,"threshold_uncertainty_score":0.3602119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09093129395418442,"score_gpt":0.380935162118403,"score_spread":0.2900038681642186,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}