{"id":"W2332689805","doi":"10.1093/gbe/evv069","title":"Mutation Rates in Plastid Genomes: They Are Lower than You Might Think","year":2015,"lang":"en","type":"letter","venue":"Genome Biology and Evolution","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":320,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Plastid; Biology; Genome; Mitochondrial DNA; Mitochondrion; Mutation rate; Genetics; Evolutionary biology; Mutation; Chloroplast; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004290267,0.0005645431,0.0008361588,0.0003998223,0.00142703,0.002347389,0.001194032,0.01542317,0.003980668],"category_scores_gemma":[0.02227857,0.0003851782,0.0005208858,0.0004223265,0.00488634,0.004363505,0.001136481,0.01810353,0.006580034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001952788,"about_ca_system_score_gemma":0.0005787236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009054599,"about_ca_topic_score_gemma":0.0007023886,"domain_scores_codex":[0.9968204,0.0007727792,0.0003347706,0.001022325,0.0007901384,0.0002596343],"domain_scores_gemma":[0.9895607,0.006275601,0.001042506,0.001038241,0.001239048,0.0008439214],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0007846263,0.0001188051,0.01419841,0.0006710631,0.0001468074,0.008782845,0.0009893132,0.0006632552,0.01498515,0.02706971,0.7120181,0.2195718],"study_design_scores_gemma":[0.0002575425,0.0003715894,0.01126141,0.000359182,0.00007770663,0.01937646,0.0008184172,0.001182756,0.007053401,0.07563356,0.8834268,0.0001812259],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.004966273,0.01051935,0.001690938,0.9659778,0.01206237,0.00001021639,0.00009567871,0.0001896358,0.00448781],"genre_scores_gemma":[0.08241934,0.009492014,0.002638334,0.8543136,0.04349451,0.00005763289,0.0001317505,0.0001037056,0.007349269],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.01542317,"threshold_uncertainty_score":0.0226894,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01012588516719947,"score_gpt":0.234586681994613,"score_spread":0.2244607968274135,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}