{"id":"W2332924145","doi":"10.1021/acs.jproteome.5b00016","title":"Deregulated Tyrosine–Phenylalanine Metabolism in Pulmonary Tuberculosis Patients","year":2015,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Grand Challenges Canada; Department of Biotechnology, Ministry of Science and Technology, India; Bill and Melinda Gates Foundation","keywords":"Metabolome; Medicine; Phenylalanine; Tyrosine; Urine; Internal medicine; Asymptomatic; Gastroenterology; Metabolite; Chemistry; Biochemistry; Amino acid","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002825209,0.0002359393,0.0003937889,0.0005204788,0.0003405993,0.0005174086,0.0001149088,0.0003452566,0.0005620527],"category_scores_gemma":[0.0008454355,0.0001679678,0.0002257917,0.000366272,0.0002434219,0.0002083768,0.0002483331,0.0003187243,0.0001006915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001900962,"about_ca_system_score_gemma":0.0001286636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001116972,"about_ca_topic_score_gemma":0.00112701,"domain_scores_codex":[0.9997827,0.00006335761,0.00002395806,0.00005941495,0.00003191507,0.00003860431],"domain_scores_gemma":[0.9995375,0.0001087251,0.0002017288,0.00002792746,0.00004647349,0.0000777332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008214299,0.00006934564,0.9850047,0.00001728887,0.00003733086,0.0006122895,0.0001953112,0.00008068052,0.009515827,0.00001514754,0.00002805662,0.00360271],"study_design_scores_gemma":[0.000007427474,0.0004031295,0.9972801,0.00000363833,0.00002432281,0.0009705253,0.0001598062,0.0002656741,0.0007897587,0.00002223416,0.00007068395,0.00000268282],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997738,0.00008794291,0.00004791411,0.000007358308,7.884881e-7,0.000001979485,0.00002185405,0.000001217895,0.00005717672],"genre_scores_gemma":[0.9998626,0.00002441754,0.00003350902,0.000006407396,0.000001713906,0.000001260969,0.00003496073,4.76306e-7,0.00003479333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001116972,"threshold_uncertainty_score":0.002220988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04888639934848348,"score_gpt":0.3366716800432957,"score_spread":0.2877852806948122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}