{"id":"W2333242766","doi":"10.1038/srep23704","title":"Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Russian Science Foundation; Russian Foundation for Basic Research; Grantová Agentura České Republiky","keywords":"Biology; Genome; Gene; Genetics; Leishmania; Virulence; Crithidia fasciculata; Population; Parasite hosting; Protozoa","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009793268,0.0001774865,0.0006279759,0.000334588,0.0001793287,0.00003147768,0.0001286658,0.0001033879,0.0000349753],"category_scores_gemma":[0.001391966,0.0001160627,0.000106602,0.0004265553,0.0007277908,0.0002500753,0.0001639121,0.00007743012,0.000004763916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002228539,"about_ca_system_score_gemma":0.0006629933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009490422,"about_ca_topic_score_gemma":0.0002002303,"domain_scores_codex":[0.9969755,0.00007069654,0.001032674,0.0007572201,0.0008364985,0.0003273468],"domain_scores_gemma":[0.997018,0.0001764992,0.0006587653,0.0009778483,0.0009367297,0.0002321944],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001688856,0.000158955,0.01937685,0.0004652291,0.00009563109,0.00002844958,0.001117182,8.051458e-7,0.9694687,0.001577464,0.001196546,0.006345274],"study_design_scores_gemma":[0.001677167,0.000840888,0.6083358,0.000494763,0.0001058362,0.00008542365,0.0004671942,0.00001068151,0.2970957,0.08154903,0.009077536,0.0002600449],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931848,0.001600551,0.002550833,0.000434128,0.0006117809,0.001037626,0.00000737054,0.00004274223,0.000530169],"genre_scores_gemma":[0.9934438,0.0000886139,0.002531374,0.000004525945,0.0000750395,0.00005462439,0.00001492804,0.00001807199,0.003769048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6723731,"threshold_uncertainty_score":0.4732901,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04846931111988736,"score_gpt":0.3212851437469921,"score_spread":0.2728158326271048,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}