{"id":"W2335703891","doi":"10.1021/bi501002d","title":"Mechanism of Action of Peptidoglycan <i>O</i>-Acetyltransferase B Involves a Ser-His-Asp Catalytic Triad","year":2014,"lang":"en","type":"article","venue":"Biochemistry","topic":"Infant Nutrition and Health","field":"Nursing","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Peptidoglycan; Catalytic triad; Enzyme kinetics; Chemistry; Amidase; Enzyme; Stereochemistry; Residue (chemistry); Autolysin; Tetrapeptide; Biochemistry; Active site; Peptide","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002419385,0.0001377811,0.0002852918,0.00006094587,0.00006119494,0.000007497579,0.0001340787,0.0001735388,0.00006536366],"category_scores_gemma":[0.00007063032,0.0001461639,0.000119853,0.0001452124,0.00007926679,0.00005109862,0.00001297878,0.0001448564,0.000006915067],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005970532,"about_ca_system_score_gemma":0.00005668502,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001406592,"about_ca_topic_score_gemma":0.00002387869,"domain_scores_codex":[0.9989548,0.00004206684,0.0003820873,0.0002106037,0.0002062851,0.0002041248],"domain_scores_gemma":[0.9992321,0.0000542395,0.0001732973,0.0003331028,0.0001026146,0.0001046846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003062211,0.0001448084,0.00007497412,0.001190083,0.0000121686,3.444204e-7,0.0002762416,7.864263e-7,0.995147,0.0004933593,0.001462041,0.0008919291],"study_design_scores_gemma":[0.001363304,0.0001654532,0.00005421033,0.0001891838,0.00003415027,0.000009764228,0.0003660782,0.0001785573,0.9959373,0.0003956106,0.001167851,0.0001385327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960846,0.00008921073,0.0004788421,0.0007658009,0.0002789264,0.0001659825,0.00007453042,0.0000600504,0.002002083],"genre_scores_gemma":[0.9987425,0.00003071497,0.0005287935,0.0002395596,0.0001881387,0.000008745832,0.00009150078,0.00001945238,0.0001506441],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002657876,"threshold_uncertainty_score":0.5960392,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.022359816152433,"score_gpt":0.2796096574071539,"score_spread":0.2572498412547209,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}