{"id":"W2335705418","doi":"10.1097/coh.0b013e32835d3271","title":"Proteomics as a novel HIV immune monitoring tool","year":2013,"lang":"en","type":"review","venue":"Current Opinion in HIV and AIDS","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Microbicide; HIV vaccine; Human immunodeficiency virus (HIV); Immune system; Computational biology; Biomarker discovery; Proteomics; Immunology; Biomarker; Medicine; Innate immune system; Clinical trial; Bioinformatics; Biology; Vaccine trial; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002226086,0.0004604953,0.001139644,0.0003180379,0.0001412975,0.00006015889,0.0002837282,0.0004000149,0.0002597827],"category_scores_gemma":[0.00007943955,0.0003432069,0.0002531642,0.0002105342,0.0001426205,0.0001074622,0.0002625556,0.0009204964,0.003686556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001260651,"about_ca_system_score_gemma":0.0002394877,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002974867,"about_ca_topic_score_gemma":9.673165e-8,"domain_scores_codex":[0.9980127,0.0001920652,0.0006448477,0.0005293922,0.0000633884,0.0005576489],"domain_scores_gemma":[0.9991978,0.0001493649,0.0001892154,0.000365607,0.00004299233,0.00005497926],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001531152,0.0003153839,0.0003918183,0.007018936,0.0001892421,0.000001209709,0.00007589343,8.731408e-8,0.00006810998,0.0004512633,0.001562183,0.9899105],"study_design_scores_gemma":[0.001226154,0.0001509911,0.0001159988,0.01353341,0.00006300746,0.00006192108,0.00002733849,3.678775e-7,0.00003721664,0.00002627752,0.9844233,0.0003340183],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001938005,0.9939237,0.00006136064,0.00002151351,0.003615623,0.001702158,0.0003155485,0.00003849525,0.0001278247],"genre_scores_gemma":[0.00003600849,0.9951521,0.000217907,6.858568e-7,0.0002586195,0.001244484,0.001680921,0.00003480019,0.001374457],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9895765,"threshold_uncertainty_score":0.999902,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1030644174462447,"score_gpt":0.3863301342254298,"score_spread":0.2832657167791851,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}