{"id":"W2338813672","doi":"10.1093/ofid/ofv133.134","title":"Whole Genome Sequencing in Tracking Intergenus Klebsiella Pneumoniae Carbapenemase (KPC) Gene Transmission in a Tertiary Care Center","year":2015,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Klebsiella pneumoniae; Tertiary care; Medicine; Whole genome sequencing; Gene; Transmission (telecommunications); Center (category theory); Genome; Microbiology; Genetics; Biology; Escherichia coli; Family medicine","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006089888,0.0002822229,0.0002237762,0.0007908553,0.0006179116,0.0005204572,0.0003737053,0.0006443525,0.001391793],"category_scores_gemma":[0.0009312016,0.0001744182,0.0001637196,0.0008131833,0.0001891935,0.0001598959,0.0005597069,0.0002761187,0.0002863147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001147686,"about_ca_system_score_gemma":0.001154142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02384274,"about_ca_topic_score_gemma":0.04560652,"domain_scores_codex":[0.9995,0.0001183191,0.00002772881,0.0001558793,0.0000881181,0.0001098042],"domain_scores_gemma":[0.9993367,0.00009509997,0.00008789139,0.00003945513,0.0002002333,0.0002405443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006820872,0.0002224643,0.8973974,0.0001953408,0.0001108427,0.003005001,0.002090973,0.001254348,0.05237104,0.0001404394,0.003595703,0.03893429],"study_design_scores_gemma":[0.00003373262,0.0003558248,0.9862607,0.00003648823,0.00007009894,0.001322561,0.001351244,0.002798166,0.004380714,0.000050504,0.003329217,0.00001066442],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966235,0.000309709,0.00086388,0.000193698,0.00001050509,0.00006431733,0.001282207,0.00005970004,0.0005924699],"genre_scores_gemma":[0.9935143,0.0001758051,0.003683223,0.0003367849,0.00001606225,0.00002683177,0.0016902,0.00001460574,0.0005420521],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02384274,"threshold_uncertainty_score":0.04740787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01153749124564193,"score_gpt":0.2637653070290497,"score_spread":0.2522278157834077,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}