{"id":"W2339266903","doi":"10.1093/infdis/jiw085","title":"Incidence of AIDS-Defining Opportunistic Infections in a Multicohort Analysis of HIV-infected Persons in the United States and Canada, 2000–2010","year":2016,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":185,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; AIDS Vancouver; University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Eye Institute; National Institute on Drug Abuse; National Institute on Minority Health and Health Disparities; National Center for Research Resources; National Institute of Mental Health; National Cancer Institute; National Institute on Alcohol Abuse and Alcoholism; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Incidence (geometry); Medicine; Human immunodeficiency virus (HIV); Virology; Environmental health; Demography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004176103,0.0001421139,0.0004849594,0.000991047,0.00007094396,0.00000835721,0.00008798597,0.00003622559,0.00004341235],"category_scores_gemma":[0.0009965781,0.00007038098,0.0001265659,0.001264361,0.0001701041,0.00007423571,0.00002370783,0.0001809481,4.54477e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002778806,"about_ca_system_score_gemma":0.0006182496,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1678171,"about_ca_topic_score_gemma":0.2857308,"domain_scores_codex":[0.9985102,0.0003027738,0.0005893423,0.00009671562,0.0003359088,0.0001650241],"domain_scores_gemma":[0.9974384,0.001534102,0.0004741373,0.0002027391,0.0002252872,0.0001252957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001822115,0.0004953372,0.9942133,0.00002587903,0.0006673327,0.0001036308,0.0006913668,0.001141457,0.001876298,0.00002405122,0.00004690263,0.0005322532],"study_design_scores_gemma":[0.001953508,0.0005755277,0.9920145,0.000243402,0.002701088,0.0004762201,0.0008776487,0.0008963157,0.0001220964,0.00003625243,0.00002990885,0.00007358081],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987024,0.0002050639,0.0001379809,0.0005252601,0.00005821429,0.0001817551,0.0001389061,0.000007572487,0.00004285371],"genre_scores_gemma":[0.9991615,0.000674566,0.00000667809,0.00009700831,0.00001161563,0.000007571887,0.00001005588,0.000008848561,0.00002215706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1179137,"threshold_uncertainty_score":0.8377244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01045096154525623,"score_gpt":0.2518295720918301,"score_spread":0.2413786105465739,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}