{"id":"W2339358896","doi":"10.1038/ncomms11375","title":"Identification of four novel susceptibility loci for oestrogen receptor negative breast cancer","year":2016,"lang":"en","type":"article","venue":"Nature Communications","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Université Laval; Centre hospitalier universitaire de Québec; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University Health Network; Royal Victoria Hospital; University of Toronto","funders":"National Institute of Environmental Health Sciences; Medical Research Council; Canadian Institutes of Health Research; National Institute for Health and Care Research; National Cancer Institute; Ovarian Cancer Research Fund; National Institutes of Health; Cancer Research UK; World Health Organization; Florida Breast Cancer Foundation; Francis Crick Institute; Wellcome Trust","keywords":"Breast cancer; Identification (biology); Oestrogen receptor; Biology; Genetics; Computational biology; Cancer; Bioinformatics; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001902213,0.00008959553,0.00009946626,0.00002268263,0.000102419,0.000008949942,0.0006157655,0.0002158108,0.00001105753],"category_scores_gemma":[0.0001724035,0.00007139034,0.00009252365,0.00007063405,0.0001553234,0.000004932826,0.0001756988,0.00009298972,0.000002115013],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005159412,"about_ca_system_score_gemma":0.0001171526,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002134183,"about_ca_topic_score_gemma":0.0006525725,"domain_scores_codex":[0.9993509,0.00003653712,0.0002459457,0.0001926172,0.00006326989,0.0001107217],"domain_scores_gemma":[0.9980286,0.00006497869,0.0002135397,0.001203406,0.0004538068,0.00003571964],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003122795,0.00009174071,0.004361334,0.00001093058,0.00005536554,3.623395e-9,0.00003097,0.000007384938,0.9899327,0.002019162,0.001357324,0.002101905],"study_design_scores_gemma":[0.002756015,0.000189532,0.1540782,0.00007890615,0.0001468229,0.00001176932,0.0003001855,0.001502538,0.79456,0.002046535,0.04370006,0.000629409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9767489,0.0009097052,0.01139509,0.005859492,0.0001551758,0.0005733441,0.004234559,0.00001402929,0.0001096437],"genre_scores_gemma":[0.9907899,0.0006369625,0.007827515,0.00006610945,0.00006567372,0.0001083027,0.0002476531,0.00001596545,0.0002419319],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1953727,"threshold_uncertainty_score":0.2911213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01440383092905508,"score_gpt":0.2894943601212179,"score_spread":0.2750905291921628,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}