{"id":"W2339718061","doi":"10.1016/j.jviromet.2016.04.009","title":"Comparative evaluation of laboratory developed real-time PCR assays and RealStar® BKV PCR Kit for quantitative detection of BK polyomavirus","year":2016,"lang":"en","type":"article","venue":"Journal of Virological Methods","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Biology; BK virus; Virology; Amplicon; Real-time polymerase chain reaction; Molecular biology; Polymerase chain reaction; TaqMan; Molecular diagnostics; Primer (cosmetics); Gene; Genetics; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005043809,0.0001632079,0.0008702745,0.0002148889,0.00005626816,0.0000050806,0.00007987892,0.0002370029,0.00008647059],"category_scores_gemma":[0.003901278,0.0000872475,0.0001772576,0.0002386252,0.0002968311,0.0001420531,0.00002772773,0.0001703879,0.000001857793],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000925483,"about_ca_system_score_gemma":0.0003080023,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000122697,"about_ca_topic_score_gemma":0.00000203768,"domain_scores_codex":[0.9966862,0.001616641,0.0008783715,0.0001793537,0.0004608427,0.0001786539],"domain_scores_gemma":[0.9948133,0.002313523,0.00112335,0.0001295667,0.00142959,0.0001907201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004396368,0.0002783637,0.0006587387,0.00003739106,0.0003523125,0.000005707658,0.0001961735,0.000009138384,0.9597165,0.000250484,0.00006703235,0.03403179],"study_design_scores_gemma":[0.006800039,0.007663104,0.1642043,0.000377463,0.001874033,0.00006068626,0.0003038952,0.001412912,0.8101237,0.006625095,0.0003669313,0.000187839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9669198,0.002453069,0.0293873,0.0002796096,0.0001233161,0.0004093768,0.00005671867,0.00001046923,0.0003603677],"genre_scores_gemma":[0.8643853,0.0006752513,0.1347612,0.00005019338,0.00006852701,0.00001189065,0.000001597126,0.00001133847,0.00003465706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1635456,"threshold_uncertainty_score":0.4670476,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.17952237991451,"score_gpt":0.4777740761004767,"score_spread":0.2982516961859667,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}