{"id":"W2340791212","doi":"10.1093/humrep/dew030","title":"HT-COMET: a novel automated approach for high throughput assessment of human sperm chromatin quality","year":2016,"lang":"en","type":"article","venue":"Human Reproduction","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; Centre in Green Chemistry and Catalysis; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; McGill University","keywords":"Comet assay; Comet; Sperm; DNA damage; Biology; Andrology; Medicine; Genetics; DNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009373364,0.0001755834,0.0004139046,0.0001403605,0.0001717992,0.00001262991,0.00006603994,0.00010742,0.0001462467],"category_scores_gemma":[0.0002940583,0.0001243291,0.0001321123,0.0001934404,0.0001190552,0.0001077216,0.00002803348,0.00008349347,0.000004846027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001965986,"about_ca_system_score_gemma":0.00005210558,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001880866,"about_ca_topic_score_gemma":0.000005941909,"domain_scores_codex":[0.9981375,0.00005400017,0.0005592829,0.00069898,0.0003450587,0.0002051994],"domain_scores_gemma":[0.9983876,0.000038052,0.0003357408,0.0008809721,0.000299989,0.00005761777],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004989766,0.000924457,0.009561837,0.0003702622,0.0001129067,6.173779e-7,0.0001158844,0.000009634667,0.9731989,0.01330881,0.0007020151,0.001644763],"study_design_scores_gemma":[0.003983294,0.0009959913,0.876669,0.0001356771,0.0002215125,0.00005774187,0.0001068464,0.0004321007,0.1161217,0.0008016016,0.0002522251,0.0002222816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9705701,0.00003098548,0.02548262,0.0003648453,0.0003213814,0.001056967,0.00001596835,0.000495887,0.001661203],"genre_scores_gemma":[0.9823469,0.000002626987,0.01507664,0.00002623836,0.0008254038,0.0001149309,0.0002319719,0.00003553185,0.001339785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8671072,"threshold_uncertainty_score":0.5069994,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08640255881572778,"score_gpt":0.3850751661965844,"score_spread":0.2986726073808567,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}