{"id":"W2341201740","doi":"10.1371/journal.pone.0153615","title":"Differences in Whole Blood Gene Expression Associated with Infection Time-Course and Extent of Fetal Mortality in a Reproductive Model of Type 2 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Infection","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Genome Alberta; Genome Prairie; McGill University; Alberta Innovates; University of Alberta; Genome Canada; Alberta Livestock and Meat Agency","keywords":"Biology; Porcine reproductive and respiratory syndrome virus; Innate immune system; Immunology; Chemokine; Arterivirus; Immune system; Interferon; Andrology; Immunity; Fetus; Gene expression; Gene; Virology; Virus; Pregnancy; Internal medicine; Medicine; Genetics; Disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001519556,0.0002114736,0.0003500945,0.0003683545,0.0001122514,0.0003295823,0.00007204751,0.0002304738,0.0006537077],"category_scores_gemma":[0.0001642847,0.0001316753,0.0002880004,0.0002547525,0.0002253276,0.0001192749,0.0001299955,0.0004171581,0.0001618534],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001677984,"about_ca_system_score_gemma":0.0001202424,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004412769,"about_ca_topic_score_gemma":0.0005196178,"domain_scores_codex":[0.9998583,0.0000186426,0.000006417911,0.00004705031,0.00002634123,0.00004328199],"domain_scores_gemma":[0.9998525,0.00003417864,0.00005201958,0.00001110546,0.00001562811,0.00003452782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005679749,0.00003998812,0.01181096,0.00002750234,0.00002451398,0.00005017716,0.00006500618,0.0000663133,0.986288,0.00001453009,0.000034156,0.001010953],"study_design_scores_gemma":[0.00001572746,0.001207534,0.8884164,0.000008371235,0.00007833348,0.0003009219,0.0002887833,0.0008460516,0.1082792,0.00004528059,0.0005001678,0.00001309834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983493,0.0002775412,0.0004354146,0.00002136786,0.000008308391,0.00001006549,0.0006924988,0.00001003068,0.000195559],"genre_scores_gemma":[0.9949865,0.0003633672,0.0008923628,0.00008332853,0.0000144481,0.00007931702,0.002192601,0.00001077603,0.001377219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006537077,"threshold_uncertainty_score":0.002186894,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06536997334280607,"score_gpt":0.2360689502657951,"score_spread":0.170698976922989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}