{"id":"W2342037152","doi":"10.1128/aem.03595-15","title":"Identification of Unknown Carboxydovore Bacteria Dominant in Deciduous Forest Soil via Succession of Bacterial Communities, <i>coxL</i> Genotypes, and Carbon Monoxide Oxidation Activity in Soil Microcosms","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Microcosm; Ecological succession; Deciduous; Carbon monoxide; Soil microbiology; Ecology; Bacteria; Biology; Soil water; Environmental chemistry; Chemistry; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001561069,0.000204495,0.0001646216,0.0005095765,0.000211594,0.0003723048,0.0001363367,0.0001824522,0.0001647582],"category_scores_gemma":[0.0002236551,0.0001138695,0.0001565844,0.0003979713,0.000187218,0.0002122374,0.0002396784,0.0001192462,0.00007367525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000128536,"about_ca_system_score_gemma":0.00019506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002724189,"about_ca_topic_score_gemma":0.003702548,"domain_scores_codex":[0.9998461,0.00001369601,0.00001180713,0.00007192196,0.00002453969,0.00003192732],"domain_scores_gemma":[0.9998123,0.00003495394,0.00006204512,0.00001085369,0.0000272467,0.0000525443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003837438,0.00009729953,0.3957066,0.00007457951,0.00003352256,0.0002108586,0.00045019,0.0002750542,0.5933593,0.00006189608,0.00002564185,0.009321315],"study_design_scores_gemma":[0.00000405745,0.0002130959,0.9805352,0.000006199844,0.00002405477,0.0002322871,0.0003577749,0.001703809,0.01668778,0.00005002493,0.0001803927,0.000005305784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995572,0.00004961822,0.0002142877,0.000003511733,5.107181e-7,0.000005432297,0.00008650462,0.000003105176,0.00007983197],"genre_scores_gemma":[0.9985253,0.00008746096,0.0009967379,0.00001110347,0.000002037782,0.00001142136,0.0002349444,0.000001864622,0.000129101],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002724189,"threshold_uncertainty_score":0.005416632,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006833158681466626,"score_gpt":0.1894023476035467,"score_spread":0.18256918892208,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}