{"id":"W2343543293","doi":"10.1097/qad.0000000000001128","title":"Non-R5-tropic HIV-1 in subtype A1 and D infections were associated with lower pretherapy CD4+ cell count but not with PI/(N)NRTI therapy outcomes in Mbarara, Uganda","year":2016,"lang":"en","type":"article","venue":"AIDS","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver","funders":"National Cancer Institute; National Institute of Mental Health; National Institute on Alcohol Abuse and Alcoholism; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Tropism; Tissue tropism; Viral load; Virology; Medicine; Maraviroc; Immunology; Internal medicine; Virus; Human immunodeficiency virus (HIV)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001591162,0.0002220562,0.0003559839,0.0001725847,0.00009793425,0.00001900238,0.0001036725,0.0001876027,0.0003928823],"category_scores_gemma":[0.00002284203,0.0001169499,0.000036847,0.0001873296,0.0002267877,0.0001240554,0.0000231451,0.0002516884,0.0002446154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001453355,"about_ca_system_score_gemma":0.0001554533,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005016538,"about_ca_topic_score_gemma":0.001504534,"domain_scores_codex":[0.9988015,0.0001568398,0.0001924135,0.0003190986,0.0000666699,0.0004635034],"domain_scores_gemma":[0.9993582,0.0002267851,0.00006730407,0.0002465967,0.00006071667,0.00004034684],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008713822,0.0007638182,0.9718665,0.000004466442,0.000264184,0.00004362583,0.000302927,0.000001636956,0.02396297,0.00002437719,0.0001671956,0.001726887],"study_design_scores_gemma":[0.01413474,0.003966109,0.9642549,0.00008573386,0.00001563916,0.00001132946,0.00005869928,7.513117e-7,0.01471263,0.00002095528,0.002527754,0.0002107542],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974458,0.0007172767,0.00004156422,0.0004449512,0.00007430307,0.0004656227,0.00009848357,0.00003427919,0.0006777042],"genre_scores_gemma":[0.991733,0.0007274876,0.00001774,0.0001160646,0.000007026732,0.000111788,0.00005231745,0.00002275802,0.007211852],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01326336,"threshold_uncertainty_score":0.4769078,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009511196653492534,"score_gpt":0.2383027926411903,"score_spread":0.2287915959876978,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}