{"id":"W2345624627","doi":"10.1186/s12879-016-1526-y","title":"Molecular characterization and antimicrobial susceptibility of Acinetobacter baumannii isolates obtained from two hospital outbreaks in Los Angeles County, California, USA","year":2016,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada","funders":"Army Research Office; National Institute of General Medical Sciences; Program for Education and Research in Biotechnology, California State University; National Institutes of Health; U.S. Department of Homeland Security","keywords":"Acinetobacter baumannii; Broth microdilution; Microbiology; Biology; Antibiotic resistance; Multilocus sequence typing; Pulsed-field gel electrophoresis; Imipenem; Molecular epidemiology; Piperacillin; Antibiotics; Genotype; Genetics; Minimum inhibitory concentration; Gene; Pseudomonas aeruginosa; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006804639,0.0002140031,0.0002527353,0.00005480081,0.00003881716,0.00003241561,0.0001074487,0.0001233797,0.00004689272],"category_scores_gemma":[0.0001697281,0.0001724865,0.00008736733,0.00006870497,0.0002143049,0.00002038086,0.000103719,0.00003807258,0.000003571982],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003430118,"about_ca_system_score_gemma":0.00007598162,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001765199,"about_ca_topic_score_gemma":0.001056824,"domain_scores_codex":[0.9988114,0.0001017416,0.0003264407,0.0004488823,0.00008424137,0.0002273058],"domain_scores_gemma":[0.9992707,0.00003042139,0.0001755712,0.0003314423,0.0001114028,0.00008047922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001131119,0.00009676475,0.5213727,0.00003067653,0.00001952925,0.000001632674,0.000006188763,0.000001965252,0.4780197,0.000006323914,0.00003568691,0.0002957077],"study_design_scores_gemma":[0.001321273,0.0001240477,0.8743688,0.00008340809,0.00004049575,0.000002253005,0.000009589163,0.00001843401,0.123567,0.00006005592,0.0001753602,0.0002292742],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929013,0.0001260988,0.002730207,0.0000174061,0.0001212096,0.0002833218,0.003776229,0.00001816067,0.00002603354],"genre_scores_gemma":[0.9989387,0.00009000349,0.00006958997,0.00005277727,0.0001430288,0.000006054845,0.0006520863,0.00002636823,0.00002141461],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3544527,"threshold_uncertainty_score":0.7033796,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004151816244854758,"score_gpt":0.2206115640703556,"score_spread":0.2164597478255008,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}