{"id":"W2345658192","doi":"10.1016/j.mimet.2016.04.015","title":"Use of flow cytometry and PCR analysis to detect 5-carboxyfluoroscein-stained obligate intracellular bacteria Lawsonia intracellularis invasion of McCoy cells","year":2016,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":10,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"School for Public Health Research; Ministry of Agriculture - Saskatchewan; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Saskatchewan Health Research Foundation; Ontario Pork","keywords":"Lawsonia intracellularis; Obligate; Flow cytometry; Biology; Bacteria; Microbiology; Intracellular parasite; Molecular biology; Genetics; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002514073,0.0003372243,0.001412865,0.0008625188,0.00005729151,0.00002964914,0.0003317254,0.0003007064,0.0005054991],"category_scores_gemma":[0.001540102,0.0001937763,0.0005533548,0.0009879839,0.0002779623,0.0002563399,0.0002677157,0.0002787318,0.000005113176],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007975537,"about_ca_system_score_gemma":0.00006133485,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002933459,"about_ca_topic_score_gemma":0.000001524314,"domain_scores_codex":[0.995858,0.001747349,0.001456395,0.0003743766,0.0001913985,0.0003724459],"domain_scores_gemma":[0.9961935,0.0015717,0.001045513,0.0004020792,0.0004454573,0.0003417808],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001975646,0.000203995,0.003287897,0.00007307917,0.0008119117,0.0001747546,0.00008766666,0.00001900765,0.9539896,0.000006138195,0.0001882309,0.03918203],"study_design_scores_gemma":[0.001106117,0.01025025,0.02412124,0.0002770113,0.001154447,0.0005301902,0.00007530913,0.00006462014,0.9576495,0.0001457875,0.00430499,0.0003205808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9075298,0.000784241,0.09094535,0.0001732414,0.0002347045,0.0002076035,0.00009545427,0.00001826549,0.00001137965],"genre_scores_gemma":[0.7468973,0.0006812946,0.2521754,0.00009546765,0.00009378127,0.000002727235,0.000003343617,0.00001842386,0.00003232264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.16123,"threshold_uncertainty_score":0.7901967,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08466974363322848,"score_gpt":0.3555390177809151,"score_spread":0.2708692741476866,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}