{"id":"W2345932431","doi":"10.1139/g10-053","title":"Towards unambiguous transcript mapping in the allotetraploid Brassica napusThis article is one of a selection of papers from the conference “Exploiting Genome-wide Association in Oilseed Brassicas: a model for genetic improvement of major OECD crops for sustainable farming”.","year":2010,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Plant Biotechnology Institute; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Genome; Polyploid; Genetics; Gene; Expressed sequence tag; Transcriptome; Ploidy; Computational biology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006535623,0.0006769125,0.0003930926,0.001151937,0.0004100146,0.0008788066,0.0006468999,0.000706821,0.001409479],"category_scores_gemma":[0.000931869,0.0005101886,0.0005764713,0.0007163931,0.0004729759,0.0005901483,0.0007219996,0.001337925,0.001444137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004377248,"about_ca_system_score_gemma":0.0005377679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001474762,"about_ca_topic_score_gemma":0.004455364,"domain_scores_codex":[0.9994168,0.00006958022,0.00004912754,0.0002543867,0.0001614543,0.00004873369],"domain_scores_gemma":[0.9994245,0.0001927279,0.0001098248,0.0001100559,0.0001138676,0.00004898928],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001723328,0.000003383507,0.0001124186,0.00004317561,0.000002265532,0.00002329414,0.00003456603,0.00004597458,0.9975579,0.0001770632,0.00003697425,0.001945718],"study_design_scores_gemma":[0.00002833386,0.0001672581,0.0149871,0.00007005747,0.00005905729,0.0008493936,0.0002617096,0.003338774,0.948375,0.00173763,0.0300881,0.00003756904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.498918,0.008235978,0.4757604,0.0010112,0.0002984813,0.000331013,0.009181224,0.001845912,0.0044178],"genre_scores_gemma":[0.4802293,0.008207465,0.4735994,0.0008802248,0.0001432131,0.0004743143,0.02478672,0.001001587,0.01067777],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001474762,"threshold_uncertainty_score":0.004715145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01972656532887018,"score_gpt":0.2111720520189601,"score_spread":0.19144548669009,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}