{"id":"W2346982356","doi":"10.1088/1367-2630/17/9/093042","title":"Continuum theory of gene expression waves during vertebrate segmentation","year":2015,"lang":"en","type":"article","venue":"New Journal of Physics","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"EaglePicher (Canada)","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Wellcome; Medical Research Council; Research Councils UK; Francis Crick Institute; Wellcome Trust","keywords":"Vertebrate; Segmentation; Body plan; Physics; Zebrafish; Expression (computer science); Evolutionary biology; Gene; Biology; Artificial intelligence; Genetics; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001132459,0.00005479892,0.00008922997,0.00001687129,0.0000182874,0.000008631309,0.00007320695,0.00003286592,0.00001118304],"category_scores_gemma":[0.00002803691,0.00004670531,0.00007670849,0.00002844388,0.000009635382,0.0000110318,0.00002333971,0.00005786855,0.000001621569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009649441,"about_ca_system_score_gemma":0.00007210988,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001471791,"about_ca_topic_score_gemma":9.106857e-7,"domain_scores_codex":[0.999562,0.00003597758,0.0001811397,0.00005704302,0.0001033356,0.00006053394],"domain_scores_gemma":[0.9994352,0.000004407177,0.0002407675,0.00009021821,0.0001623516,0.0000670313],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001201587,0.00004197164,0.00007423043,0.000004291996,0.00003271122,0.000001442765,0.0001389177,0.00007992022,0.9960437,0.0001206766,0.001350023,0.001991888],"study_design_scores_gemma":[0.0006906502,0.0002083618,0.00005813693,0.00002344346,0.00001906091,0.00001951838,0.0002422437,0.00002484373,0.9958309,0.002043341,0.000792953,0.00004655281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9415243,0.0003965918,0.05746562,0.00001975919,0.0003101495,0.00003007824,0.000002869529,0.000001130835,0.0002495318],"genre_scores_gemma":[0.9966447,0.00006930938,0.00220597,0.00002211726,0.000538388,3.084855e-7,0.00001055682,0.000008889914,0.000499716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05525966,"threshold_uncertainty_score":0.1904587,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0172077718629552,"score_gpt":0.252944782363973,"score_spread":0.2357370105010178,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}