{"id":"W2361995636","doi":"10.1128/genomea.00321-16","title":"Draft Genome Sequence of Bacillus licheniformis CG-B52, a Highly Virulent Bacterium of Pacific White Shrimp ( <i>Litopenaeus vannamei</i> ), Isolated from a Colombian Caribbean Aquaculture Outbreak","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"FP7 Food, Agriculture and Fisheries, Biotechnology; International Development Research Centre; European Commission; Fundación para la promoción de la investigación y la tecnología","keywords":"Litopenaeus; Shrimp; Biology; Outbreak; Bacillus licheniformis; White (mutation); Penaeus; Aquaculture; Virulence; Shellfish; Whole genome sequencing; Fishery; Velvet; Strain (injury); Genome; Bacteria; Genetics; Fish <Actinopterygii>; Gene; Anatomy; Aquatic animal; Virology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003038711,0.001413453,0.001231891,0.001667531,0.0008677966,0.001272829,0.0005872345,0.0008971564,0.003153652],"category_scores_gemma":[0.001594518,0.0003844356,0.0008301119,0.002761499,0.0003243944,0.0004980324,0.0005992049,0.001599276,0.001955958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008950739,"about_ca_system_score_gemma":0.003096554,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02636767,"about_ca_topic_score_gemma":0.02483716,"domain_scores_codex":[0.999738,0.00002379986,0.00003469573,0.00008379156,0.00007612346,0.00004350678],"domain_scores_gemma":[0.9990265,0.000197539,0.000279562,0.00006791478,0.000250678,0.0001777675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003212275,0.000330506,0.01293123,0.005928442,0.0001881849,0.002921501,0.001889282,0.00179429,0.897611,0.0008207296,0.01529226,0.05708041],"study_design_scores_gemma":[0.0007139529,0.001906142,0.4518898,0.002326093,0.002438597,0.006272803,0.004159106,0.007608942,0.1581054,0.001622554,0.3624513,0.0005053129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4705207,0.01148465,0.01948893,0.001749276,0.0008100932,0.0005979596,0.4834385,0.002215592,0.009694215],"genre_scores_gemma":[0.2196115,0.004374982,0.03676007,0.0002569699,0.0001520282,0.0003367192,0.7328275,0.0004682204,0.005212004],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.02636767,"threshold_uncertainty_score":0.05242836,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0122181227138761,"score_gpt":0.2163624068074133,"score_spread":0.2041442840935372,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}