{"id":"W2366192345","doi":"10.1089/cmb.2010.0121","title":"A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement Distances","year":2010,"lang":"en","type":"article","venue":"Journal of Computational Biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Breakpoint; Genome; Evolutionary biology; Biology; Algorithm; Mathematics; Computer science; Computational biology; Genetics; Chromosome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04996642,0.001178061,0.002177438,0.005848743,0.001425971,0.004223446,0.001890361,0.003428573,0.002183708],"category_scores_gemma":[0.182531,0.0006983668,0.001569787,0.002693956,0.005891077,0.005697797,0.004534754,0.002643362,0.0003938858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001996013,"about_ca_system_score_gemma":0.0017356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009713924,"about_ca_topic_score_gemma":0.001392206,"domain_scores_codex":[0.9815738,0.01117632,0.001331548,0.002275202,0.003041751,0.0006013641],"domain_scores_gemma":[0.8777003,0.09508055,0.005790576,0.01383262,0.005696894,0.001899078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.002459924,0.0001628931,0.04419287,0.000431548,0.001185414,0.0002452951,0.0006208148,0.767371,0.008469868,0.1121594,0.001348219,0.06135283],"study_design_scores_gemma":[0.0002780903,0.001010741,0.0214051,0.0001843577,0.0002283452,0.0005189781,0.0005838337,0.7734113,0.0145777,0.1847425,0.002834666,0.0002244857],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.3979006,0.00162287,0.5925567,0.001134233,0.0002041661,0.0002009984,0.0008265812,0.000954804,0.00459904],"genre_scores_gemma":[0.8151522,0.0003611829,0.1815304,0.0002486532,0.00007115607,0.0002442909,0.001380494,0.0003905304,0.0006211525],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.04996642,"threshold_uncertainty_score":0.2642509,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01023872614914101,"score_gpt":0.2954890485433716,"score_spread":0.2852503223942306,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}