{"id":"W2372291773","doi":"10.1139/gen-2016-0019","title":"Nucleotide diversity, natural variation, and evolution of <i>Flexible culm-1</i> and <i>Strong culm-2</i> lodging resistance genes in rice","year":2016,"lang":"en","type":"article","venue":"Genome","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Key Technologies Research and Development Program","keywords":"Biology; Haplotype; Oryza sativa; Genetics; Oryza rufipogon; Allele; Nucleotide diversity; Gene; Single-nucleotide polymorphism; Oryza; Genotype","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002598835,0.0001838827,0.000210939,0.0007899213,0.0002850944,0.0002482703,0.0001635048,0.0001986502,0.0004696692],"category_scores_gemma":[0.0002450667,0.0001519191,0.0002412553,0.0007495885,0.0002763913,0.00009123385,0.0002241939,0.0002937683,0.000154409],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002538527,"about_ca_system_score_gemma":0.0001538805,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001719339,"about_ca_topic_score_gemma":0.003764689,"domain_scores_codex":[0.9998117,0.00003497096,0.00001487201,0.00008794172,0.00002841777,0.00002208499],"domain_scores_gemma":[0.9998143,0.00003792356,0.00006855238,0.00001928184,0.00001855335,0.00004131839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006852178,0.0001109102,0.215698,0.000105103,0.0003405623,0.0003560373,0.001088364,0.001056931,0.7673663,0.0005491407,0.0002290657,0.0124142],"study_design_scores_gemma":[0.00001578145,0.00005878319,0.9923578,0.000006346338,0.00005523497,0.0002822304,0.0001064969,0.001343801,0.004538072,0.0001261219,0.001093235,0.00001606627],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989125,0.00009105172,0.0004956769,0.000008234128,0.000001693582,0.000003275479,0.0002630722,0.000005443746,0.0002190582],"genre_scores_gemma":[0.9979863,0.00006567437,0.0007589212,0.00001876718,0.000003917855,0.00001134491,0.0008747976,0.00001005837,0.0002702329],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001719339,"threshold_uncertainty_score":0.003418684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006969441440333381,"score_gpt":0.1932340525735876,"score_spread":0.1862646111332542,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}