{"id":"W2375605384","doi":"10.1155/2016/4703406","title":"Gut Microbiota and Metagenomic Advancement in Digestive Disease","year":2016,"lang":"en","type":"article","venue":"Gastroenterology Research and Practice","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute on Alcohol Abuse and Alcoholism","keywords":"Gut flora; Medicine; Disease; Fatty liver; Cirrhosis; Dysbiosis; Metagenomics; Nonalcoholic fatty liver disease; Alcoholic liver disease; Fecal bacteriotherapy; Microbiome; Liver disease; Clostridium difficile; Immunology; Bioinformatics; Antibiotics; Gastroenterology; Microbiology; Biology; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097033,0.0001065329,0.0001208366,0.00009569453,0.00009776006,0.0000206907,0.00009858844,0.00006303821,0.0000166037],"category_scores_gemma":[0.0005292931,0.00007973202,0.00001595123,0.00004407869,0.0003497032,0.00001754719,0.000260654,0.0001550352,0.00001284412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002522388,"about_ca_system_score_gemma":0.00007587011,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002732199,"about_ca_topic_score_gemma":0.0001122559,"domain_scores_codex":[0.9982982,0.0005430847,0.0001503594,0.0004243583,0.00007052043,0.0005135323],"domain_scores_gemma":[0.9992585,0.0001690655,0.00004736391,0.000209568,0.00009262447,0.000222839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.004977653,0.0001342864,0.1054083,0.00002251233,0.00003616819,0.0000341202,0.00004318288,2.958707e-7,0.8859417,0.00009262373,0.0009952293,0.002313973],"study_design_scores_gemma":[0.00309198,0.002527594,0.8669536,0.00004727812,0.00002026746,0.0002622606,0.0002216727,0.000001742513,0.001170725,0.0001524169,0.1254153,0.0001351558],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9801098,0.002108996,0.0002423856,0.01705414,0.00004032578,0.0002595021,0.0000419008,0.000003233131,0.0001397552],"genre_scores_gemma":[0.9901922,0.007601216,0.0006828198,0.0008707523,0.00006103204,0.00002901898,0.00001859295,0.00001106576,0.0005332547],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8847709,"threshold_uncertainty_score":0.3251377,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03866371070638106,"score_gpt":0.3754686597261493,"score_spread":0.3368049490197682,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}