{"id":"W2381287051","doi":"10.1371/journal.pone.0155441","title":"Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Leech Biology and Applications","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Royal Ontario Museum","funders":"Universidad Nacional Autónoma de México; Generalitat Valenciana; FP7 People: Marie-Curie Actions; Consejo Superior de Investigaciones Científicas; Ministerio de Economía y Competitividad; Consejo Nacional de Ciencia y Tecnología; Natural Sciences and Engineering Research Council of Canada; European Commission; Royal Ontario Museum","keywords":"Biology; Clitellata; Mitochondrial DNA; Genome; Gene duplication; Phylogenetic tree; Evolutionary biology; Genetics; Gene; Phylogenetics; Monophyly; Zoology; Clade","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001285157,0.0002004369,0.0001651731,0.001038155,0.00022644,0.0001408418,0.0001472236,0.0001818878,0.0005399084],"category_scores_gemma":[0.0003081429,0.0000879972,0.000190745,0.00063856,0.00014715,0.0001674241,0.0002129076,0.0001885068,0.0001297383],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001785236,"about_ca_system_score_gemma":0.0001509089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001080195,"about_ca_topic_score_gemma":0.003378128,"domain_scores_codex":[0.9999236,0.00001132333,0.000007578049,0.00003142566,0.00001391195,0.00001210935],"domain_scores_gemma":[0.9997537,0.00005052882,0.00009564364,0.00001827389,0.00003842567,0.00004341718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001570499,0.00001213809,0.02598194,0.0001389313,0.00002220962,0.0001034305,0.0002550906,0.0001390273,0.9658301,0.00007513481,0.00003484028,0.007250155],"study_design_scores_gemma":[0.00001020338,0.0001897419,0.9722868,0.00001943412,0.00005503513,0.0005526476,0.0002386176,0.001129226,0.02228223,0.00006808912,0.003155327,0.00001279783],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981657,0.0003378158,0.0005599243,0.00001839601,0.000002570256,0.000007606235,0.0005803112,0.00001228997,0.0003152747],"genre_scores_gemma":[0.9940237,0.0003069822,0.002463022,0.00004165276,0.000008961292,0.00004885945,0.002678242,0.00001141324,0.0004171503],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001080195,"threshold_uncertainty_score":0.002147853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1163996845237329,"score_gpt":0.2662672051510012,"score_spread":0.1498675206272683,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}