{"id":"W2385435022","doi":"10.1089/cmb.2011.0087","title":"Genome Aliquoting Revisited","year":2011,"lang":"en","type":"article","venue":"Journal of Computational Biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Genome; Breakpoint; Polyploid; Approximation algorithm; Ancestor; Combinatorics; Mathematics; Biology; Computer science; Algorithm; Genetics; Gene; Chromosome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002942559,0.00008020169,0.0001383471,0.00008867856,0.00003106664,0.000005331602,0.0001685668,0.00007405424,0.00009067058],"category_scores_gemma":[0.0000430682,0.00006885586,0.00009509841,0.00006529511,0.00004873994,0.000003307981,0.00004904136,0.00007465699,0.00001483239],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001024305,"about_ca_system_score_gemma":0.00006039913,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001087633,"about_ca_topic_score_gemma":2.502373e-7,"domain_scores_codex":[0.9992966,0.00007311178,0.000323137,0.0001064975,0.00007581787,0.0001248396],"domain_scores_gemma":[0.9992823,0.00001531998,0.0002823985,0.00007384205,0.0002895503,0.00005657513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003868593,0.000276494,0.03600427,0.00003321638,0.0009915481,0.00004430107,0.0004538218,0.002436975,0.9469806,0.003247686,0.0007976466,0.008346579],"study_design_scores_gemma":[0.006513469,0.008523244,0.7010957,0.00008225476,0.0003021989,0.002752819,0.000358239,0.0007420756,0.05060213,0.07451977,0.1531727,0.001335373],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9485713,0.001231243,0.04778456,0.0001072333,0.0002026686,0.00007036035,0.000008490972,0.000004372183,0.002019738],"genre_scores_gemma":[0.9680806,0.00006153277,0.0311885,0.0001910247,0.0003580011,8.120528e-7,0.00005549576,0.000009012933,0.00005504497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8963785,"threshold_uncertainty_score":0.2807861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02241927681391968,"score_gpt":0.2626114851712909,"score_spread":0.2401922083573712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}