{"id":"W2396784827","doi":"10.1371/journal.pone.0151829","title":"Bile Acids and Dysbiosis in Non-Alcoholic Fatty Liver Disease","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":384,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University Health Network; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Internal medicine; Fatty liver; Lithocholic acid; Steatohepatitis; Bile acid; Chenodeoxycholic acid; Gastroenterology; Cholic acid; FGF19; Dysbiosis; Deoxycholic acid; Alcoholic liver disease; Endocrinology; Medicine; Disease; Cirrhosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003172577,0.000274046,0.0003117759,0.000535779,0.0003067001,0.0004550994,0.0001198341,0.0002491361,0.001543396],"category_scores_gemma":[0.0005414113,0.0001365585,0.0001240516,0.0007166875,0.000179101,0.0002008854,0.0003669673,0.000238612,0.0001505414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001762316,"about_ca_system_score_gemma":0.0001568109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001250603,"about_ca_topic_score_gemma":0.001981866,"domain_scores_codex":[0.9998485,0.0000572414,0.00002350845,0.00002784343,0.00002401367,0.00001894767],"domain_scores_gemma":[0.9995769,0.00005724844,0.0002281693,0.00001842297,0.00004465603,0.00007453329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006844969,0.00006341474,0.9906968,0.00008878226,0.00007134576,0.0001855681,0.00007628516,0.00003614483,0.00191899,0.00002877411,0.00006226747,0.006087182],"study_design_scores_gemma":[0.000009427304,0.00018087,0.998701,0.00001855138,0.00003400709,0.0004358736,0.00009853594,0.00006718171,0.0001688788,0.00005534798,0.00022849,0.000001819608],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995739,0.003640313,0.00006066696,0.00007957368,0.000007238349,0.000006250675,0.00008396499,0.000002840301,0.0003801518],"genre_scores_gemma":[0.9985751,0.001001751,0.0001275685,0.00002762432,0.00001247741,0.000004511171,0.00009452983,9.335592e-7,0.0001554425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001543396,"threshold_uncertainty_score":0.005163193,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02190861505894262,"score_gpt":0.2288271135479135,"score_spread":0.2069184984889709,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}