{"id":"W2397044753","doi":"10.7717/peerj.2595","title":"The mosaic architecture of <i>Aeromonas salmonicida</i> subsp. <i>salmonicida</i> pAsa4 plasmid and its consequences on antibiotic resistance","year":2016,"lang":"en","type":"article","venue":"PeerJ","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; University of Bern","keywords":"Aeromonas salmonicida; Biology; Plasmid; Mobile genetic elements; Antibiotic resistance; Microbiology; Gene; Antibiotics; Bacteria; Genetics; Genomic island; Escherichia coli; Horizontal gene transfer; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005197293,0.0002148646,0.0001437103,0.0005126367,0.0001639314,0.0003105199,0.000156549,0.0001705133,0.0007080215],"category_scores_gemma":[0.000243877,0.0001494642,0.0003045079,0.0003951389,0.000262669,0.0001331374,0.0002837421,0.000299334,0.0002423721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003575906,"about_ca_system_score_gemma":0.0004437061,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005905123,"about_ca_topic_score_gemma":0.005449983,"domain_scores_codex":[0.9999087,0.000007173482,0.000005418326,0.00002684644,0.00002580685,0.000026056],"domain_scores_gemma":[0.9997151,0.00003221997,0.0001285832,0.00003308941,0.00004171018,0.00004919045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009921816,0.00001236896,0.009590398,0.00001893263,0.00001104714,0.00008978201,0.00004330005,0.00009467356,0.9876702,0.00008452421,0.00001708826,0.002268441],"study_design_scores_gemma":[0.00001764164,0.000489554,0.5499197,0.00001751627,0.0001126893,0.002644632,0.0003599034,0.002343048,0.4386797,0.0003453241,0.005038181,0.00003218371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980782,0.00009980399,0.001113318,0.00001735025,0.000002117484,0.00000781638,0.0002687581,0.00002656294,0.0003860201],"genre_scores_gemma":[0.9958276,0.0001006446,0.001838362,0.00001263738,0.000002700217,0.00001089467,0.001265801,0.00001465999,0.0009265903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005905123,"threshold_uncertainty_score":0.01174152,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008245316713412484,"score_gpt":0.2136774844080295,"score_spread":0.205432167694617,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}