{"id":"W2397326546","doi":"10.1038/srep10932","title":"Phenotypic diversity within a Pseudomonas aeruginosa population infecting an adult with cystic fibrosis","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; Centre for Social Innovation; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Cystic Fibrosis Canada; National Sanitarium Association","keywords":"Pseudomonas aeruginosa; Sputum; Cystic fibrosis; Phenotype; Biology; Population; Microbiology; Chronic infection; Immunology; Genetics; Medicine; Pathology; Bacteria; Tuberculosis; Gene; Immune system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003128794,0.0001408737,0.0002667181,0.0005947707,0.0003453931,0.0004470614,0.0001042654,0.0002740222,0.0004443334],"category_scores_gemma":[0.0009456731,0.0001072629,0.0001194526,0.0003562487,0.0003184325,0.0002543778,0.0003470291,0.0002194128,0.0001239399],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001241954,"about_ca_system_score_gemma":0.00009866963,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001264532,"about_ca_topic_score_gemma":0.001637004,"domain_scores_codex":[0.9996295,0.00006007069,0.00003201974,0.0001030334,0.0001205739,0.0000546941],"domain_scores_gemma":[0.9995338,0.0001081851,0.0001587038,0.00003949303,0.00008777536,0.00007207161],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000187696,0.00008475078,0.8316484,0.00002226267,0.00003522972,0.0005754753,0.0008532853,0.0001365762,0.1582222,0.00003392118,0.00007071042,0.008129397],"study_design_scores_gemma":[0.000001683219,0.0002796898,0.9932804,0.000003297472,0.00001212196,0.001637434,0.0004026204,0.0003265751,0.00392209,0.00002305026,0.0001065255,0.000004618144],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999736,0.00003993933,0.0001123614,0.000005662965,4.823855e-7,0.000004083481,0.00003158145,0.000001680451,0.00006817118],"genre_scores_gemma":[0.9996024,0.0000397507,0.0002414471,0.000009221417,0.000002288745,0.000004037616,0.00005557775,7.768185e-7,0.00004461757],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001264532,"threshold_uncertainty_score":0.002514303,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0135723861031687,"score_gpt":0.2280384893270326,"score_spread":0.2144661032238639,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}