{"id":"W2399689377","doi":"10.1128/genomea.00383-16","title":"Draft Genome Sequence of a Novel Acidophilic Iron-Oxidizing <i>Firmicutes</i> Species, “ <i>Acidibacillus ferrooxidans</i> ” (SLC66 <sup>T</sup> )","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Ministério da Ciência, Tecnologia e Inovação; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Vale Canada Limited","keywords":"Oxidizing agent; Whole genome sequencing; Firmicutes; Biology; Sequence (biology); Genome; Genetics; Microbiology; Bacteria; Gene; Chemistry; Organic chemistry; 16S ribosomal RNA","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004812246,0.001441594,0.00142439,0.001781986,0.001112987,0.001216524,0.0008550179,0.001426502,0.004276478],"category_scores_gemma":[0.001781926,0.0006688652,0.001286463,0.00336576,0.000342908,0.0007313737,0.0006845985,0.002123663,0.003105768],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006601976,"about_ca_system_score_gemma":0.00332182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01089949,"about_ca_topic_score_gemma":0.01184906,"domain_scores_codex":[0.9997208,0.00002787281,0.00003384351,0.00009565454,0.00008275922,0.00003916624],"domain_scores_gemma":[0.9989542,0.0001961251,0.0002709197,0.00008035399,0.00032778,0.0001706736],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003020934,0.0004322822,0.008908097,0.00470204,0.0003561807,0.002252327,0.001221073,0.002723089,0.8848705,0.001658891,0.03813743,0.05171712],"study_design_scores_gemma":[0.001108359,0.001707305,0.1891248,0.001331247,0.002922372,0.004654856,0.001793142,0.01148069,0.2147642,0.004003383,0.5665335,0.0005761397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.2532081,0.007285389,0.06430238,0.003371389,0.001978427,0.0006831939,0.6568044,0.003690897,0.008675752],"genre_scores_gemma":[0.06329161,0.002689202,0.06095464,0.0003710477,0.0001819611,0.0003094698,0.8671294,0.0005513589,0.004521351],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01089949,"threshold_uncertainty_score":0.02167207,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03727884410914119,"score_gpt":0.2328432641861817,"score_spread":0.1955644200770405,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}