{"id":"W2399865579","doi":"10.1038/srep25864","title":"Nuclease Footprints in Sperm Project Past and Future Chromatin Regulatory Events","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; University of Edinburgh; Wayne State University","keywords":"CTCF; Chromatin; Biology; Micrococcal nuclease; Histone; Genetics; Cell biology; Chromatin remodeling; Sperm; Pioneer factor; Enhancer; Transcription factor; Nucleosome; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002423908,0.0001491237,0.0002027133,0.0004043188,0.0002110025,0.0004543319,0.0001953492,0.0003018075,0.002445612],"category_scores_gemma":[0.0004046724,0.0001951524,0.0002161018,0.0002700185,0.0002015373,0.0001879737,0.000231546,0.0003437131,0.000315535],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002443371,"about_ca_system_score_gemma":0.0001860451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001174276,"about_ca_topic_score_gemma":0.003529427,"domain_scores_codex":[0.9999031,0.00000886812,0.000004492824,0.00004430277,0.00002774018,0.00001140999],"domain_scores_gemma":[0.999809,0.00007218005,0.0000458325,0.00002515815,0.00002126097,0.00002659449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001951561,0.00002032841,0.009375455,0.0001320209,0.00003662545,0.00008704158,0.0001195508,0.001583109,0.9749368,0.001052692,0.0001769228,0.01228422],"study_design_scores_gemma":[0.000027148,0.000389071,0.1205291,0.00004819445,0.0000880464,0.0006820541,0.0002026281,0.01624234,0.8517141,0.001927848,0.00809875,0.00005071644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9797926,0.001277972,0.01545792,0.00004542184,0.00003058997,0.000009556703,0.0012731,0.0002533946,0.001859388],"genre_scores_gemma":[0.9874094,0.0002923784,0.009630919,0.00004528213,0.000004555986,0.000008557648,0.001236381,0.00004636552,0.001326168],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002445612,"threshold_uncertainty_score":0.008181393,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005031477298356752,"score_gpt":0.2151069196218826,"score_spread":0.2100754423235258,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}