{"id":"W2404399045","doi":"10.1093/gbe/evw262","title":"Salmonid chromosome evolution as revealed by a novel method for comparing RADseq linkage maps","year":2016,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Rimouski; Centre Intégré de Santé et de Services Sociaux des Laurentides; Université Laval","funders":"","keywords":"Biology; Synteny; Evolutionary biology; Genome; Genetics; Chromosome; Phylogenetic tree; Salvelinus; Genetic linkage; Sister group; Gene; Clade; Trout","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003542806,0.0001950227,0.0002594257,0.00003946276,0.0002262881,0.000008269135,0.0001278194,0.0002773071,0.000004781335],"category_scores_gemma":[0.00008589622,0.000152742,0.00008502163,0.00005221098,0.0001439964,0.000002161898,0.0001280382,0.00004999478,0.00001024624],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006395924,"about_ca_system_score_gemma":0.00004961724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005978275,"about_ca_topic_score_gemma":0.00002787591,"domain_scores_codex":[0.9987771,0.00006963654,0.0002420665,0.0005134066,0.00003924127,0.0003585622],"domain_scores_gemma":[0.9994504,0.00004322734,0.0001153292,0.0002266123,0.0000847514,0.00007970342],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001457605,0.00003390202,0.01843507,0.00001720747,0.00009489961,1.130351e-7,0.00002198124,0.000005322802,0.97769,0.002167729,0.0005512645,0.0008366915],"study_design_scores_gemma":[0.01118818,0.004280305,0.5077112,0.00008664789,0.0003174923,0.0002501275,0.0002226619,0.0004548613,0.09013835,0.03636607,0.3470138,0.001970296],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7217792,0.009181839,0.2675139,0.0003798944,0.0002359033,0.0003561712,0.0003450443,0.00000989236,0.0001982179],"genre_scores_gemma":[0.9909127,0.0006242788,0.006970108,0.00009946872,0.0003718277,0.00009019477,0.0001864792,0.00001850148,0.0007263854],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8875517,"threshold_uncertainty_score":0.6228636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01309109849183986,"score_gpt":0.2660961664218487,"score_spread":0.2530050679300088,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}