{"id":"W2405647782","doi":"10.1016/bs.aambs.2014.09.002","title":"Escherichia coli ST131: The Quintessential Example of an International Multiresistant High-Risk Clone","year":2014,"lang":"en","type":"review","venue":"Advances in applied microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Escherichia coli; clone (Java method); Biology; Lineage (genetic); Phylogenetic tree; Transmission (telecommunications); Antibiotic resistance; Human pathogen; Molecular epidemiology; Microbiology; Drug resistance; Genetics; Gene; Genotype; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004676751,0.0004677154,0.001216285,0.00008974651,0.00006568761,0.00001961206,0.001225585,0.0005547175,0.00005147838],"category_scores_gemma":[0.0001086676,0.0003389812,0.0002201057,0.0001447399,0.0006376726,0.000006811487,0.0003386996,0.0003743586,0.00001693605],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005101766,"about_ca_system_score_gemma":0.0001302101,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001100814,"about_ca_topic_score_gemma":0.0004990297,"domain_scores_codex":[0.9973823,0.0003528994,0.0009481989,0.0008567097,0.00007260309,0.0003872419],"domain_scores_gemma":[0.9977319,0.0001715595,0.00104294,0.0009461574,0.00006173976,0.00004569226],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000671003,0.0004439634,0.0001801653,0.003330264,0.0006340047,0.000008715284,0.0000630379,0.00007380515,0.3335787,0.004308249,0.0003338529,0.6563742],"study_design_scores_gemma":[0.0004876919,0.0001335606,0.00003867476,0.0003940623,0.0001315946,0.00001538424,0.0000287543,0.000002050855,0.00464816,0.0001128958,0.9936411,0.0003660453],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0369974,0.9581004,0.001295102,0.000007116786,0.001374248,0.001025275,0.0005689136,0.00001767462,0.0006138853],"genre_scores_gemma":[0.01953245,0.9726864,0.005189053,0.00004748895,0.0004409099,0.0000566113,0.001894685,0.00006717012,0.00008527983],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9933073,"threshold_uncertainty_score":0.9999062,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009397721476471797,"score_gpt":0.2887623955738173,"score_spread":0.2793646740973455,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}