{"id":"W2409299293","doi":"10.1093/molbev/msw103","title":"Novel Hydrogenosomes in the Microaerophilic Jakobid<i>Stygiella incarcerata</i>","year":2016,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Organelle; Trichomonas; Cardiolipin; Mitochondrion; Microaerophile; Anaerobic exercise; Cell biology; Biochemistry; Genetics; Trichomonas vaginalis; Bacteria; Physiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002027827,0.0001150105,0.00009001303,0.00004369764,0.00009632864,0.000007947405,0.0001966509,0.0001961951,0.000005119605],"category_scores_gemma":[0.00004265126,0.00007340686,0.00004916147,0.00007973367,0.0002111021,0.000003584984,0.0001180345,0.0000654856,0.00001343182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001094517,"about_ca_system_score_gemma":0.00002791375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005133218,"about_ca_topic_score_gemma":0.00005443,"domain_scores_codex":[0.9992156,0.0001241669,0.0001079385,0.0002923985,0.00004407293,0.0002157955],"domain_scores_gemma":[0.9996604,0.0000146586,0.0000349456,0.0002355539,0.00002252916,0.00003189103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000476088,0.00003544028,0.04748063,0.000003597728,0.00001919577,0.0000038839,0.0000270048,0.00000183,0.9472714,0.00419858,0.0001297429,0.0007810956],"study_design_scores_gemma":[0.003232441,0.0008502968,0.364136,0.00003902327,0.00005269068,0.0003165416,0.0001243023,0.00001948449,0.5983194,0.01289749,0.01934284,0.0006694635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9813382,0.002178823,0.01496668,0.0008394812,0.00005915989,0.0001635359,0.00004068416,0.000006147512,0.0004072915],"genre_scores_gemma":[0.9987946,0.0001637313,0.0001745721,0.0006606281,0.00006367889,0.00001424627,0.00004893974,0.000006066109,0.00007357441],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.348952,"threshold_uncertainty_score":0.2993445,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006148801354689989,"score_gpt":0.224736234307878,"score_spread":0.218587432953188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}