{"id":"W2409497639","doi":"10.1038/srep12525","title":"Draft genome of the most devastating insect pest of coffee worldwide: the coffee berry borer, Hypothenemus hampei","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; Agricultural Research Service; York University; King Abdullah University of Science and Technology; NYU Langone Medical Center; U.S. Department of Agriculture; Laboratory Directed Research and Development; U.S. Department of Energy","keywords":"Biology; Genome; PEST analysis; Gene; Berry; Genetics; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003914008,0.0009323611,0.0009533024,0.001570508,0.0008598272,0.001155986,0.0008434553,0.0006908897,0.003614919],"category_scores_gemma":[0.001435598,0.0004634342,0.00121854,0.002382174,0.0002322216,0.0004937857,0.0005833544,0.001069157,0.001767954],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007301292,"about_ca_system_score_gemma":0.001797721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007342365,"about_ca_topic_score_gemma":0.00824202,"domain_scores_codex":[0.9998178,0.00002161255,0.00001734831,0.00006130699,0.00005601722,0.00002587787],"domain_scores_gemma":[0.999286,0.0001411271,0.0001643986,0.00004672753,0.0002047954,0.0001570489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002655465,0.0001841723,0.01368696,0.005168199,0.0005047169,0.002715133,0.001088815,0.003613832,0.9120497,0.001029393,0.01451785,0.0427858],"study_design_scores_gemma":[0.0008521646,0.001697621,0.4373897,0.00122904,0.003983021,0.0079082,0.002150454,0.01344487,0.1834005,0.003921594,0.3436553,0.0003676566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4607383,0.008323461,0.04802663,0.001696541,0.0005809493,0.0004902402,0.4700873,0.003520102,0.006536587],"genre_scores_gemma":[0.1288777,0.003113497,0.06544521,0.0002479751,0.00009428749,0.000277023,0.7980631,0.0007626875,0.003118543],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.007342365,"threshold_uncertainty_score":0.01459926,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01819473565178907,"score_gpt":0.2347785128223828,"score_spread":0.2165837771705937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}