{"id":"W2411904803","doi":"10.1038/srep11253","title":"HIV-infected sex workers with beneficial HLA-variants are potential hubs for selection of HIV-1 recombinants that may affect disease progression","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"Medical Research Council; Engineering and Physical Sciences Research Council; University of Oxford; Royal Society","keywords":"CTL*; Biology; Immunology; Human leukocyte antigen; Viremia; Immune system; Cohort; Phenotype; Genetics; Virus; Medicine; Gene; Antigen; Internal medicine; CD8","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000248302,0.0002437039,0.0002110289,0.0003146155,0.0005679539,0.0004216498,0.0001733452,0.0002458348,0.003815103],"category_scores_gemma":[0.0007390723,0.0001565772,0.0001662525,0.0002109112,0.0002530309,0.0002384096,0.0002955593,0.0003376918,0.0004157967],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007711771,"about_ca_system_score_gemma":0.000147756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001095075,"about_ca_topic_score_gemma":0.001541757,"domain_scores_codex":[0.9998544,0.00003370502,0.000007650428,0.00003000344,0.0000220459,0.00005212197],"domain_scores_gemma":[0.999655,0.00005576959,0.0001451994,0.00003021001,0.00002138836,0.00009257162],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002925943,0.00007525982,0.9822045,0.00002300488,0.00002913695,0.0005876305,0.0003179781,0.00002227461,0.007250306,0.0001096604,0.0001504669,0.008937074],"study_design_scores_gemma":[0.00001850417,0.0004547127,0.9917988,0.00002749627,0.00005347087,0.003576256,0.001604752,0.0001660329,0.001138414,0.0002899368,0.0008642165,0.000007411609],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993161,0.0002136085,0.00006260266,0.00002971394,0.000003248918,0.00000296826,0.00002098131,0.000003025,0.0003477903],"genre_scores_gemma":[0.9994828,0.0001023405,0.00005286408,0.00001921385,0.000009415125,0.00000132423,0.00003058885,0.000001158831,0.000300399],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003815103,"threshold_uncertainty_score":0.01276284,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02209702620173026,"score_gpt":0.2843733100611262,"score_spread":0.2622762838593959,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}